Gorai.005G259700 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.005G259700 T071923_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.788 0.655
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.788 0.655
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.784 0.547
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.785 0.692
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.785 0.692
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G259700.1 bZIP 211 277
Gorai.005G259700.2 bZIP 211 274
Gorai.005G259700.3 bZIP 211 265
Gorai.005G259700.4 bZIP 211 245
Gorai.005G259700.5 bZIP 211 241
Gorai.005G259700.6 bZIP 211 263

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000018933 Ailuropoda melanoleuca ENSAMEG00000018933 I 0.000
ZNF581 Canis familiaris ENSCAFG00000032256 I 0.000
ENSCSAG00000019657 Chlorocebus sabaeus ENSCSAG00000019657 I 0.000
ZNF581 Equus caballus ENSECAG00000003138 I 0.000
ZNF581 Felis catus ENSFCAG00000011501 I 0.000
ZNF581 Gorilla gorilla ENSGGOG00000015656 I 0.000
ZNF581 Homo sapiens ENSG00000171425 D 0.000
ENSSTOG00000015924 Ictidomys tridecemlineatus ENSSTOG00000015924 I 0.000
ENSP00000270451 Macaca fascicularis ENSP00000270451 I 0.000
ZNF581 Macaca mulatta ENSMMUG00000004805 I 0.000
ZNF581 Microcebus murinus ENSMICG00000004530 I 0.000
ENSMPUG00000020190 Mustela putorius furo ENSMPUG00000020190 I 0.000
ENSNLEG00000010553 Nomascus leucogenys ENSNLEG00000010553 I 0.000
ZNF581 Otolemur garnettii ENSOGAG00000031176 I 0.000
ZNF581 Pan troglodytes ENSPTRG00000033802 I 0.000
ENSPANG00000014005 Papio anubis ENSPANG00000014005 I 0.000
ENSPPYG00000010427 Pongo abelii ENSPPYG00000010427 I 0.000
ZNF581 Pteropus vampyrus ENSPVAG00000004546 I 0.000
ZNF581 Tursiops truncatus ENSTTRG00000000984 I 0.000