Gorai.013G004400 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.013G004400 T071989_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK09021.1
M01155_2.00
Cannabis sativa
NNTGACGTMA

TKACGTCANN
PBM
Lambert et al.(2019)
pTH10175
0.783 0.980
TGA6
M01780_2.00
Arabidopsis thaliana
NNTGACGTMA

TKACGTCANN
PBM
Weirauch et al.(2014)
pTH8691
0.783 0.959
TGA6
M01055_2.00
Arabidopsis thaliana
NNVTGACGTMN

NKACGTCABNN
PBM
Sullivan et al.(2014)
pTH8858
0.783 0.959
TGA2
M01784_2.00
Arabidopsis thaliana
NNACGTCABN

NVTGACGTNN
PBM
Weirauch et al.(2014)
pTH8820
0.783 0.959
TGA2
M00856_2.00
Arabidopsis thaliana
NVTGACGTMN

NKACGTCABN
PBM
Franco-Zorrilla et al.(2014)
TGA2
0.783 0.959
TGA5
M01785_2.00
Arabidopsis thaliana
VTGACGTN

NACGTCAB
PBM
Weirauch et al.(2014)
pTH8180
0.783 0.959
TGA2
M06785_2.00
Arabidopsis thaliana
YNMCGYCABCD

HGVTGRCGKNR
Dap-seq
OMalley et al.(2016)
TGA2_colamp_v31
0.783 0.959
TGA2
M06786_2.00
Arabidopsis thaliana
NNNNNDNHGMTGACGTCAYH

DRTGACGTCAKCDNHNNNNN
Dap-seq
OMalley et al.(2016)
TGA2_col
0.783 0.959
TGA5
M06787_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN

NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA5_col_v3a
0.783 0.959
TGA6
M06773_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNN

NNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA6_col_a
0.783 0.959
TGA6
M06774_2.00
Arabidopsis thaliana
NRTGACGTCAKCDNN

NNHGMTGACGTCAYN
Dap-seq
OMalley et al.(2016)
TGA6_colamp_a
0.783 0.959
TGA2
M09917_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_01
0.783 0.959
TGA2
M09918_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA2_Q2
0.783 0.959
HBP1B_WHEAT
M10043_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1B_Q6
0.783 0.939
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G004400.1 bZIP 129 177
Gorai.013G004400.2 bZIP 129 177

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TGA6 Arabidopsis thaliana AT3G12250 D 0.783
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.783
PK09021.1 Cannabis sativa PK09021.1 D 0.783
TGA5 Arabidopsis thaliana AT5G06960 D 0.783
TGA2 Arabidopsis thaliana AT5G06950 D 0.783
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.783
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.783
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.783
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.783
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.783
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.783
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.783
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.783
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.783
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.783
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.783
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.783
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.783
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.783
Pm016643 Prunus mume Pm016643 I 0.783
Pm028917 Prunus mume Pm028917 I 0.783
30131.m007163 Ricinus communis 30131.m007163 I 0.783
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.783
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.783
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.783
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.783
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.783
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.783
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.783
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.783
mgf003015m Mimulus guttatus mgf003015m I 0.790
mgf005858m Mimulus guttatus mgf005858m I 0.783
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.783
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.783
MDP0000320524 Malus domestica MDP0000320524 I 0.783
MDP0000536881 Malus domestica MDP0000536881 I 0.783
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.783
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.783
Pavir.Ea01074 Panicum virgatum Pavir.Ea01074 I 0.798
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.783
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.783
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.783
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.783
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.783
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.783
PK13754.1 Cannabis sativa PK13754.1 I 0.783
MDP0000300532 Malus domestica MDP0000300532 I 0.783
MDP0000262210 Malus domestica MDP0000262210 I 0.783
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.783
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.783
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.783
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.783
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.783
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.783
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.783
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.783
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.783
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.783
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.783
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.783
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.783
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.783
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.783
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.783
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.783
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.783
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.783
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.783
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.783
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.783
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.783
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.783
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.783
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.783
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.783
Bo1g139470 Brassica oleracea Bo1g139470 I 0.783
Bo2g007460 Brassica oleracea Bo2g007460 I 0.783
Bo3g064830 Brassica oleracea Bo3g064830 I 0.783
Bo5g133550 Brassica oleracea Bo5g133550 I 0.783
Bo9g175710 Brassica oleracea Bo9g175710 I 0.783
Bra001443 Brassica rapa Bra001443 I 0.783
Bra009241 Brassica rapa Bra009241 I 0.783
Bra028713 Brassica rapa Bra028713 I 0.783
Bra034767 Brassica rapa Bra034767 I 0.783
Bra038705 Brassica rapa Bra038705 I 0.783
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.783
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.783
OB01G21470 Oryza brachyantha OB01G21470 I 0.783
OBART01G11380 Oryza barthii OBART01G11380 I 0.783
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.783
TCM_023491 Theobroma cacao TCM_023491 I 0.783
TCM_023492 Theobroma cacao TCM_023492 I 0.783
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.783
PAN Vitis vinifera VIT_01s0011g03230 I 0.783
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.783
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.783
Ca_07170 Cicer arietinum Ca_07170 I 0.783
Ca_10901 Cicer arietinum Ca_10901 I 0.783
Ca_17971 Cicer arietinum Ca_17971 I 0.783
Cla002918 Citrullus lanatus Cla002918 I 0.783
Cla010092 Citrullus lanatus Cla010092 I 0.783
Cla022393 Citrullus lanatus Cla022393 I 0.783
TCM_011845 Theobroma cacao TCM_011845 I 0.783
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.783
TGA2.3 Oryza sativa OS01G0279900 I 0.783
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.783
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.783
PAN Populus trichocarpa POPTR_0008s11710 I 0.783
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.783
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.783
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.783
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.783
Si002195m.g Setaria italica Si002195m.g I 0.783
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.783
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.783
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.787
mgf016587m Mimulus guttatus mgf016587m N 0.787
BRADI1G43900 Brachypodium distachyon BRADI1G43900 N 0.785
chr4.CM0234.370.nd Lotus japonicus chr4.CM0234.370.nd N 0.785