Pavir.Fb01824 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.Fb01824 T072396_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.786 0.683
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.786 0.683
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01824.1.p bZIP 109 171

Links

Other bZIP family TFs
Other Panicum virgatum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AC186606.4_FG003 Zea mays AC186606.4_FG003 I 0.860
Sb07g028960 Sorghum bicolor Sb07g028960 I 0.860
Sb07g028900 Sorghum bicolor Sb07g028900 I 0.860
Pavir.Fa00602 Panicum virgatum Pavir.Fa00602 I 0.860
OMERI08G14760 Oryza meridionalis OMERI08G14760 I 0.848
OBART08G18720 Oryza barthii OBART08G18720 I 0.848
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I 0.848
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I 0.848
OS08G0487100 Oryza sativa OS08G0487100 I 0.848
LPERR08G15570 Leersia perrieri LPERR08G15570 I 0.848
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I 0.848
ONIVA08G20730 Oryza nivara ONIVA08G20730 I 0.848
BGIOSGA026766 Oryza indica BGIOSGA026766 I 0.848
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I 0.846
Si014433m.g Setaria italica Si014433m.g I 0.844
GRMZM2G144480 Zea mays GRMZM2G144480 I 0.842
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I 0.839
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I 0.839
OPUNC08G16670 Oryza punctata OPUNC08G16670 I 0.830
ONIVA09G14270 Oryza nivara ONIVA09G14270 I 0.818
OLONG_013604 Oryza longistaminata OLONG_013604 I 0.818
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I 0.818
OPUNC09G12240 Oryza punctata OPUNC09G12240 I 0.818
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I 0.818
OPUNC09G12140 Oryza punctata OPUNC09G12140 I 0.818
OS09G0474000 Oryza sativa OS09G0474000 I 0.818
OBART09G13760 Oryza barthii OBART09G13760 I 0.818
OB09G20300 Oryza brachyantha OB09G20300 I 0.818
LPERR09G10020 Leersia perrieri LPERR09G10020 I 0.818
BGIOSGA029595 Oryza indica BGIOSGA029595 I 0.818
OBART09G13750 Oryza barthii OBART09G13750 I 0.818
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I 0.818
OB08G25840 Oryza brachyantha OB08G25840 N 0.813
GLYMA11G04920 Glycine max GLYMA11G04920 I 0.811
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I 0.806
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I 0.806
MLOC_6062 Hordeum vulgare MLOC_6062 N 0.805
BRADI3G38840 Brachypodium distachyon BRADI3G38840 N 0.805
GRMZM2G358796 Zea mays GRMZM2G358796 N 0.805
Si031238m.g Setaria italica Si031238m.g I 0.804
MTR_5g015090 Medicago truncatula MTR_5g015090 I 0.802
GLYMA01G40370 Glycine max GLYMA01G40370 I 0.801
GLYMA17G17100 Glycine max GLYMA17G17100 I 0.801
Sb02g027410 Sorghum bicolor Sb02g027410 I 0.797
Ca_09362 Cicer arietinum Ca_09362 I 0.794
GRMZM2G020799 Zea mays GRMZM2G020799 I 0.788
BGIOSGA008968 Oryza indica BGIOSGA008968 I 0.786
Lus10011722.g Linum usitatissimum Lus10011722.g I 0.786
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I 0.786
OLONG_004835 Oryza longistaminata OLONG_004835 I 0.786
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I 0.786
OBART02G31030 Oryza barthii OBART02G31030 I 0.786
OMERI02G29910 Oryza meridionalis OMERI02G29910 I 0.786
OS02G0728001 Oryza sativa OS02G0728001 D 0.786
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I 0.786
OPUNC02G28720 Oryza punctata OPUNC02G28720 I 0.786
ONIVA02G34180 Oryza nivara ONIVA02G34180 I 0.786
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I 0.785
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I 0.785
Lus10019273.g Linum usitatissimum Lus10019273.g N 0.784
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I 0.783