Thhalv10013890m.g (Eutrema salsugineum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Thhalv10013890m.g T072662_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TGA1
M01788_2.00
Arabidopsis thaliana
NVTGACGHNN

NNDCGTCABN
PBM
Weirauch et al.(2014)
pTH7231
0.794 0.980
TGA1
M01134_2.00
Arabidopsis thaliana
NVTKACGHNN

NNDCGTMABN
PBM
Lambert et al.(2019)
pTH7599
0.794 0.980
TGA1
M06793_2.00
Arabidopsis thaliana
HNDVTGACGTCAKCD

HGMTGACGTCABHND
Dap-seq
OMalley et al.(2016)
TGA1_colamp_a
0.794 0.980
TGA1
M06794_2.00
Arabidopsis thaliana
DRTGACGTCAKCDDH

DHHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA1_col
0.794 0.980
TGA1
M02657_2.00
Arabidopsis thaliana
HNACGTCABSV

BSVTGACGTND
SELEX
Mathelier et al.(2014)
MA0588.1
0.794 0.980
TGA4
M01786_2.00
Arabidopsis thaliana
RVTKACGTND

HNACGTMABY
PBM
Weirauch et al.(2014)
pTH8278
0.794 0.939
TGA4
M06788_2.00
Arabidopsis thaliana
TSACGTCAKCD

HGMTGACGTSA
Dap-seq
OMalley et al.(2016)
TGA4_col_a
0.794 0.939
TGA4
M06789_2.00
Arabidopsis thaliana
DRTGACGTCAKCDNH

DNHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA4_colamp_a
0.794 0.939
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10013890m bZIP 77 125

Links

Other bZIP family TFs
Other Eutrema salsugineum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TGA1 Arabidopsis lyrata Al_scaffold_0008_3070 I 0.794
TGA4 Arabidopsis lyrata fgenesh2_kg.6__963__AT5G10030.1 I 0.794
TGA4 Arabidopsis thaliana AT5G10030 D 0.794
TGA1 Arabidopsis thaliana AT5G65210 D 0.794
Bostr.0568s0268 Boechera stricta Bostr.0568s0268 I 0.794
Bostr.13175s0098 Boechera stricta Bostr.13175s0098 I 0.794
Bo9g173550 Brassica oleracea Bo9g173550 N 0.783
Bo9g018570 Brassica oleracea Bo9g018570 I 0.794
Bo3g099410 Brassica oleracea Bo3g099410 I 0.794
Bo2g009670 Brassica oleracea Bo2g009670 N 0.783
Bo00615s190 Brassica oleracea Bo00615s190 I 0.794
Bra037809 Brassica rapa Bra037809 I 0.794
Bra037374 Brassica rapa Bra037374 I 0.794
Bra031871 Brassica rapa Bra031871 I 0.794
Bra028604 Brassica rapa Bra028604 N 0.783
Bra024366 Brassica rapa Bra024366 I 0.794
Bra009063 Brassica rapa Bra009063 N 0.783
Cagra.0917s0063 Capsella grandiflora Cagra.0917s0063 I 0.794
Cagra.1085s0054 Capsella grandiflora Cagra.1085s0054 I 0.794
Carubv10001361m.g Capsella rubella Carubv10001361m.g I 0.794
Carubv10026623m.g Capsella rubella Carubv10026623m.g I 0.794
Thhalv10004438m.g Eutrema salsugineum Thhalv10004438m.g I 0.794