zeb2.S (Xenopus laevis)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		XB-GENE-865280 T076299_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.990 0.990
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.819 0.819
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.819 0.819
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.819 0.819
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.819 0.819
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.819 0.819
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.819 0.819
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.819 0.819
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.819 0.819
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.819 0.819
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.819 0.819
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.819 0.819
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.814 0.814
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAF81689 C2H2 ZF 210 233
AAF81689 C2H2 ZF 240 262
AAF81689 C2H2 ZF 281 303
AAF81689 C2H2 ZF 309 330
AAF81689 Homeodomain 649 699
AAF81689 C2H2 ZF 998 1020
AAF81689 C2H2 ZF 1026 1048
AAF81689 C2H2 ZF 1054 1075
AAH84972 C2H2 ZF 211 234
AAH84972 C2H2 ZF 241 263
AAH84972 C2H2 ZF 282 304
AAH84972 C2H2 ZF 310 331
AAH84972 Homeodomain 650 700
AAH84972 C2H2 ZF 999 1021
AAH84972 C2H2 ZF 1027 1049
AAH84972 C2H2 ZF 1055 1076
BAA94081 C2H2 ZF 211 234
BAA94081 C2H2 ZF 241 263
BAA94081 C2H2 ZF 282 304
BAA94081 C2H2 ZF 310 331
BAA94081 Homeodomain 650 700
BAA94081 C2H2 ZF 999 1021
BAA94081 C2H2 ZF 1027 1049
BAA94081 C2H2 ZF 1055 1076

Links

Other C2H2 ZF,Homeodomain family TFs
Other Xenopus laevis TFs

Invalid Input OrderBy

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action