CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000018575
(
Ovis aries
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSOARG00000018575
T076474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.932
0.932
ZSCAN29
M01165_2.00
Homo sapiens
WAAYYCGRWT
AWYCGRRTTW
PBM
Lambert et al.(2019)
pTH11268
0.932
0.727
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.707
0.707
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.707
0.707
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.707
0.707
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000019944
MADF
367
429
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHVLEPCAFFEDMD
ENSOARP00000019944
MADF
517
588
ILHETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
ENSOARP00000019944
C2H2 ZF
781
803
SKCSVCGKCFGRSRSLVRHQRIH
ENSOARP00000019944
C2H2 ZF
809
831
FKCLDCGKSFNDSSNFGAHQRIH
ENSOARP00000019944
C2H2 ZF
837
859
YRCGECGKCFSQSSSLIIHQRTH
ENSOARP00000019944
C2H2 ZF
865
887
YQCGECGRSFTNSSHFSAHQRVH
ENSOARP00000019944
C2H2 ZF
893
915
YKCVDCEKSFNNCTRFREHRRVH
ENSOARP00000019944
C2H2 ZF
922
943
GCIQCGRRFSKSSVLTKHREAH
ENSOARP00000019945
MADF
363
425
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHVLEPCAFFEDMD
ENSOARP00000019945
MADF
513
584
ILHETRFYEALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
Links
Other
C2H2 ZF,MADF
family TFs
Other
Ovis aries
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy