ZSCAN29 (Homo sapiens)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSG00000140265 T076454_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M01165_2.00		 Homo sapiens
WAAYYCGRWT
AWYCGRRTTW		 PBM
Lambert et al.(2019)
pTH11268		 (Direct) (Direct)
ZSCAN29
M04384_2.00		 Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX		 (Direct) (Direct)
ZSCAN29
M04385_2.00		 Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX		 (Direct) (Direct)
ZSCAN29
M08271_2.00		 Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01165_2.00 MADF 52 119
M01165_2.00 MADF 215 282

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000380174 MADF 263 330
ENSP00000380174 MADF 426 493
ENSP00000380174 C2H2 ZF 678 700
ENSP00000380174 C2H2 ZF 706 728
ENSP00000380174 C2H2 ZF 734 756
ENSP00000380174 C2H2 ZF 762 784
ENSP00000380174 C2H2 ZF 790 812
ENSP00000380174 C2H2 ZF 818 840
ENSP00000456089 MADF 262 329
ENSP00000456089 MADF 425 492
ENSP00000456883 C2H2 ZF 288 310
ENSP00000456883 C2H2 ZF 316 338
ENSP00000456883 C2H2 ZF 344 366
ENSP00000456883 C2H2 ZF 372 394
ENSP00000456883 C2H2 ZF 400 422
ENSP00000456883 C2H2 ZF 428 450

Links

Other C2H2 ZF,MADF family TFs
Other Homo sapiens TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.996
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.996
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.993
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.993
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.993
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.989
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.989
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.989
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.985
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.985
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.985
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.985
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.985
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.985
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.981
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.981
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.981
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.978
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.978
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.974
ZSCAN29 Oryctolagus cuniculus ENSOCUG00000011265 I 0.971
ENSSARG00000000845 Sorex araneus ENSSARG00000000845 I 0.971
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.970
ZSCAN29 Myotis lucifugus ENSMLUG00000008922 I 0.969
ENSOARG00000009883 Ovis aries ENSOARG00000009883 I 0.968
Zscan29 Mus musculus ENSMUSG00000050619 I 0.967
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.963
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.963
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.963
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.959
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.959
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.948
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.948
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.936
ZKSCAN2 Myotis lucifugus ENSMLUG00000010566 I 0.932
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.932
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.911
ENSOANG00000007331 Ornithorhynchus anatinus ENSOANG00000007331 I 0.909
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.896
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.894
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.877
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.752
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.752
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.752
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.752
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.752
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.751
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.749
ZSCAN29 Pteropus vampyrus ENSPVAG00000008846 I 0.746
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.744
ZSCAN29 Echinops telfairi ENSETEG00000019734 I 0.739
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.735
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.735
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.735
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.735
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.735
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.735
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.735
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.733
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.732
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.731
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.731
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.731
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.731
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.728
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.728
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.720
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.720
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.705
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.705
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.701