ENSSSCG00000007824 (Sus scrofa)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSSSCG00000007824 T076496_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.981 0.981
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.749 0.749
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.749 0.749
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.749 0.749
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000008352 MADF 229 291
ENSSSCP00000008352 MADF 383 450
ENSSSCP00000008352 C2H2 ZF 643 665
ENSSSCP00000008352 C2H2 ZF 671 693
ENSSSCP00000008352 C2H2 ZF 699 721
ENSSSCP00000008352 C2H2 ZF 727 749
ENSSSCP00000008352 C2H2 ZF 755 777
ENSSSCP00000008352 C2H2 ZF 783 805
ENSSSCP00000028086 MADF 229 291
ENSSSCP00000028086 MADF 383 450
ENSSSCP00000028086 C2H2 ZF 643 665
ENSSSCP00000028086 C2H2 ZF 671 693

Links

Other C2H2 ZF,MADF family TFs
Other Sus scrofa TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 1.000
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.989
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.989
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.985
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.985
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.985
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.985
ZKSCAN2 Otolemur garnettii ENSOGAG00000009286 N 0.982
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.981
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.981
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.977
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.977
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.973
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.973
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.970
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.970
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.970
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.966
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.966
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.966
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.962
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.954
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.951
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.947
ENSOARG00000018575 Ovis aries ENSOARG00000018575 I 0.935
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.932
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.928
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.864
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.844
ZKSCAN2 Pteropus vampyrus ENSPVAG00000016982 N 0.781
ZKSCAN2 Felis catus ENSFCAG00000015272 N 0.762
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.757
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.753
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.753
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.753
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.753
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.749
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.749
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.749
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.749
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.749
ZSCAN29 Homo sapiens ENSG00000140265 D 0.749
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.749
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.749
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.745
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.745
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.745
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.745
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.745
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.745
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.741
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.741
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.741
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.739
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.738
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.738
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.738
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.735
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.730
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.730
ENSBTAP00000014826-D1 Bos grunniens ENSBTAP00000014826-D1 I 0.726
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.722
Zscan29 Mus musculus ENSMUSG00000050619 I 0.720
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.711
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.707
ZKSCAN2 Echinops telfairi ENSETEG00000013545 N 0.703
ENSOANG00000022313 Ornithorhynchus anatinus ENSOANG00000022313 I 0.703
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.701