ZSCAN29 (Pan troglodytes)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSPTRG00000006992 T076484_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.993 0.993
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.993 0.993
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.993 0.993
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000011944 MADF 263 330
ENSPTRP00000011944 MADF 426 493
ENSPTRP00000011944 C2H2 ZF 678 700
ENSPTRP00000011944 C2H2 ZF 706 728
ENSPTRP00000011944 C2H2 ZF 734 756
ENSPTRP00000011944 C2H2 ZF 762 784
ENSPTRP00000011944 C2H2 ZF 790 812
ENSPTRP00000011944 C2H2 ZF 818 840

Links

Other C2H2 ZF,MADF family TFs
Other Pan troglodytes TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.996
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.996
ZSCAN29 Homo sapiens ENSG00000140265 D 0.993
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.993
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.993
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.993
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.989
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.989
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.989
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.989
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.985
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.985
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.985
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.985
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.981
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.981
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.981
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.978
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.978
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.974
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.970
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.966
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.966
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.963
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.959
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.959
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.955
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.955
Zscan29 Mus musculus ENSMUSG00000050619 I 0.948
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.940
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.911
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.894
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.877
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.876
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.756
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.756
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.756
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.756
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.756
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.755
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.753
ZSCAN29 Pteropus vampyrus ENSPVAG00000008846 I 0.750
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.748
ZSCAN29 Echinops telfairi ENSETEG00000019734 I 0.743
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.739
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.739
ENSPANG00000007624 Papio anubis ENSPANG00000007624 I 0.739
ENSP00000331626 Macaca fascicularis ENSP00000331626 I 0.739
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.739
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.739
ZKSCAN2 Gorilla gorilla ENSGGOG00000004769 I 0.739
Zkscan2 Mus musculus ENSMUSG00000030757 I 0.737
ZKSCAN2 Monodelphis domestica ENSMODG00000015452 I 0.736
ZKSCAN2 Dasypus novemcinctus ENSDNOG00000044830 I 0.735
ZKSCAN2 Loxodonta africana ENSLAFG00000007287 I 0.735
ZKSCAN2 Sorex araneus ENSSARG00000003883 I 0.735
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.735
ENSCPOG00000005222 Cavia porcellus ENSCPOG00000005222 I 0.732
ZKSCAN2 Tursiops truncatus ENSTTRG00000015263 I 0.731
ENSTSYG00000009836 Tarsius syrichta ENSTSYG00000009836 I 0.731
ZKSCAN2 Choloepus hoffmanni ENSCHOG00000013904 I 0.724
ZKSCAN2 Bos taurus ENSBTAG00000011162 I 0.709
ZKSCAN2 Procavia capensis ENSPCAG00000014144 I 0.705
ENSSHAG00000013237 Sarcophilus harrisii ENSSHAG00000013237 I 0.705