Zscan29 (Rattus norvegicus)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSRNOG00000012419 T076488_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.876 0.876
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.876 0.876
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.876 0.876
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000034442 MADF 244 318
ENSRNOP00000034442 MADF 413 479
ENSRNOP00000034442 C2H2 ZF 657 679
ENSRNOP00000034442 C2H2 ZF 685 707
ENSRNOP00000034442 C2H2 ZF 713 735
ENSRNOP00000034442 C2H2 ZF 741 763
ENSRNOP00000034442 C2H2 ZF 769 791
ENSRNOP00000034442 C2H2 ZF 797 819

Links

Other C2H2 ZF,MADF family TFs
Other Rattus norvegicus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.907
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.899
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.899
ZSCAN29 Homo sapiens ENSG00000140265 D 0.896
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.896
Zscan29 Mus musculus ENSMUSG00000050619 I 0.888
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.887
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.887
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.883
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.883
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.883
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.883
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.883
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.883
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.880
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.880
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.880
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.876
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.876
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.876
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.876
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.876
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.876
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.872
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.872
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.869
ZSCAN29 Procavia capensis ENSPCAG00000010380 I 0.867
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.865
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.865
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.865
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.861
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.859
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.854
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.792
ENSCSAG00000006472 Chlorocebus sabaeus ENSCSAG00000006472 I 0.713
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.710
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.710
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.710
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.710
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.710
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.707
Zkscan2 Rattus norvegicus ENSRNOG00000024245 I 0.702