ZSCAN29 (Procavia capensis)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSPCAG00000010380 T076480_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.894 0.894
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.894 0.894
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.894 0.894
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.701 0.701
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000009654 MADF 228 297
ENSPCAP00000009654 MADF 394 461
ENSPCAP00000009654 C2H2 ZF 642 664
ENSPCAP00000009654 C2H2 ZF 670 692
ENSPCAP00000009654 C2H2 ZF 698 720
ENSPCAP00000009654 C2H2 ZF 726 748
ENSPCAP00000009654 C2H2 ZF 754 776
ENSPCAP00000009654 C2H2 ZF 784 804

Links

Other C2H2 ZF,MADF family TFs
Other Procavia capensis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPPYG00000006412 Pongo abelii ENSPPYG00000006412 I 0.898
ENSAMEG00000015432 Ailuropoda melanoleuca ENSAMEG00000015432 I 0.898
ZSCAN29 Gorilla gorilla ENSGGOG00000002879 I 0.898
ZSCAN29 Felis catus ENSFCAG00000002712 I 0.894
ENSNLEG00000004938 Nomascus leucogenys ENSNLEG00000004938 I 0.894
ZSCAN29 Homo sapiens ENSG00000140265 D 0.894
ZSCAN29 Pan troglodytes ENSPTRG00000006992 I 0.894
Myotis_brandtii_ZSCAN29_10025802 Myotis brandtii Myotis_brandtii_ZSCAN29_10025802 I 0.894
ZSCAN29 Tursiops truncatus ENSTTRG00000016234 I 0.894
ZSCAN29 Equus caballus ENSECAG00000012289 I 0.894
ENSMPUG00000010249 Mustela putorius furo ENSMPUG00000010249 I 0.894
ZSCAN29 Dasypus novemcinctus ENSDNOG00000018427 I 0.894
ZSCAN29 Callithrix jacchus ENSCJAG00000002903 I 0.894
ZSCAN29 Choloepus hoffmanni ENSCHOG00000009706 I 0.894
ZSCAN29 Otolemur garnettii ENSOGAG00000000128 I 0.890
ZSCAN29 Canis familiaris ENSCAFG00000012056 I 0.890
ZSCAN29 Bos taurus ENSBTAG00000014478 I 0.890
ENSBTAP00000014826-D2 Bos grunniens ENSBTAP00000014826-D2 I 0.890
ZSCAN29 Microcebus murinus ENSMICG00000010051 I 0.886
ZSCAN29 Loxodonta africana ENSLAFG00000001195 I 0.886
ENSTSYG00000004828 Tarsius syrichta ENSTSYG00000004828 I 0.886
ENSSSCG00000004709 Sus scrofa ENSSSCG00000004709 I 0.886
ENSSTOG00000006892 Ictidomys tridecemlineatus ENSSTOG00000006892 I 0.883
ENSSHAG00000012821 Sarcophilus harrisii ENSSHAG00000012821 I 0.879
ENSPANG00000018475 Papio anubis ENSPANG00000018475 I 0.875
ZSCAN29 Macaca mulatta ENSMMUG00000017070 I 0.871
Zscan29 Mus musculus ENSMUSG00000050619 I 0.871
ENSP00000380174 Macaca fascicularis ENSP00000380174 I 0.871
Zscan29 Rattus norvegicus ENSRNOG00000012419 I 0.867
ENSCSAG00000009079 Chlorocebus sabaeus ENSCSAG00000009079 I 0.867
ZSCAN29 Monodelphis domestica ENSMODG00000017820 I 0.864
ZSCAN29 Erinaceus europaeus ENSEEUG00000006869 I 0.860
ZSCAN29 Cavia porcellus ENSCPOG00000001782 I 0.852
ZSCAN29 Tupaia belangeri ENSTBEG00000010257 I 0.807
ZKSCAN2 Callithrix jacchus ENSCJAG00000020749 I 0.701
ZKSCAN2 Homo sapiens ENSG00000155592 D 0.701
ENSSTOG00000000417 Ictidomys tridecemlineatus ENSSTOG00000000417 I 0.701
ENSMICG00000001583 Microcebus murinus ENSMICG00000001583 I 0.701
ENSPPYG00000007207 Pongo abelii ENSPPYG00000007207 I 0.701
ENSAMEG00000006980 Ailuropoda melanoleuca ENSAMEG00000006980 I 0.701
ZKSCAN2 Canis familiaris ENSCAFG00000017477 I 0.701
ZKSCAN2 Pan troglodytes ENSPTRG00000007906 I 0.701
ZKSCAN2 Sus scrofa ENSSSCG00000007823 I 0.701
ENSNLEG00000011727 Nomascus leucogenys ENSNLEG00000011727 I 0.701
ENSSSCG00000007824 Sus scrofa ENSSSCG00000007824 I 0.701