ACEP20581 (Atta cephalotes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACEP20581 T079465_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.823 0.974
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.823 0.974
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.823 0.974
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.814 0.957
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.814 0.957
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.814 0.957
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.814 0.957
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.795 0.887
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.795 0.887
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.795 0.887
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.795 0.887
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP20581-PA C2H2 ZF 207 229
ACEP20581-PA C2H2 ZF 235 257
ACEP20581-PA C2H2 ZF 263 285
ACEP20581-PA C2H2 ZF 291 313
ACEP20581-PA C2H2 ZF 319 341

Links

Other C2H2 ZF family TFs
Other Atta cephalotes TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400038539 Solanum tuberosum PGSC0003DMG400038539 N 0.000
PGSC0003DMG400042688 Solanum tuberosum PGSC0003DMG400042688 N 0.000
PGSC0003DMG400044457 Solanum tuberosum PGSC0003DMG400044457 N 0.000
PGSC0003DMG400044761 Solanum tuberosum PGSC0003DMG400044761 N 0.000
Solyc04g056550.1 Solanum lycopersicum Solyc04g056550.1 N 0.000
Solyc04g056740.1 Solanum lycopersicum Solyc04g056740.1 N 0.000
Solyc06g054680.1 Solanum lycopersicum Solyc06g054680.1 N 0.000
Solyc06g059780.1 Solanum lycopersicum Solyc06g059780.1 N 0.000