CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo9g123640
(
Brassica oleracea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Bo9g123640
T081793_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g123640.1
C2H2 ZF
72
94
HICCECGKRFKSGKALGGHKRIH
Bo9g123640.1
C2H2 ZF
125
146
DCCVCHKKFTSMKALYGHMRFH
Links
Other
C2H2 ZF
family TFs
Other
Brassica oleracea
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10015446m.g
Eutrema salsugineum
Thhalv10015446m.g
N
0.827
Bra002836
Brassica rapa
Bra002836
N
0.827
Bostr.26833s0643
Boechera stricta
Bostr.26833s0643
N
0.803
AT5G56200
Arabidopsis thaliana
AT5G56200
N
0.803
Carubv10026299m.g
Capsella rubella
Carubv10026299m.g
N
0.803
Cagra.3745s0017
Capsella grandiflora
Cagra.3745s0017
N
0.803
fgenesh2_kg.8__1525__AT5G56200.1
Arabidopsis lyrata
fgenesh2_kg.8__1525__AT5G56200.1
N
0.798
Bo3g021160
Brassica oleracea
Bo3g021160
N
0.763
Bra028943
Brassica rapa
Bra028943
N
0.763