CBN28055 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN28055 T083075_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-29
M00613_2.00 		Caenorhabditis elegans
WTTTTTTN
NAAAAAAW		 PBM
Narasimhan et al.(2015)
pTH9930 		0.771 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN28055 C2H2 ZF 9 31
CBN28055 C2H2 ZF 39 60
CBN28055 C2H2 ZF 66 90
CBN28055 C2H2 ZF 96 118
CBN28055 C2H2 ZF 130 152

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN14672 Caenorhabditis brenneri CBN14672 I 0.827
DME_0000431501 Dracunculus medinensis DME_0000431501 N 0.773
nDi.2.2.2.g02124 Dirofilaria immitis nDi.2.2.2.g02124 N 0.773
WBGene00247150 Onchocerca volvulus WBGene00247150 N 0.773
TCLT_0000227601 Thelazia callipaeda TCLT_0000227601 N 0.773
LOAG_03289 Loa loa LOAG_03289 N 0.773
Bm6154 Brugia malayi Bm6154 N 0.773
CBG02753 Caenorhabditis briggsae CBG02753 I 0.771
CRE02078 Caenorhabditis remanei CRE02078 I 0.771
lin-29 Caenorhabditis elegans WBGene00003015 D 0.771
CJA15666 Caenorhabditis japonica CJA15666 I 0.763