CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_04390
(
Coprinopsis cinerea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CC1G_04390
T083125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_kg.C_10393_CONSTRUCT
M01189_2.00
PBM CONSTRUCTS
NRCTGCGSN
NSCGCAGYN
PBM
Lambert et al.(2019)
pTH11154
0.796
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU93411
C2H2 ZF
248
270
YKCNACPRSFARAYNLKTHMATH
EAU93411
C2H2 ZF
278
303
HVCPHRSCGRSFSRKHDLSRHLVSIH
Links
Other
C2H2 ZF
family TFs
Other
Coprinopsis cinerea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_kg.C_10393_CONSTRUCT
PBM CONSTRUCTS
estExt_fgenesh1_kg.C_10393_CONSTRUCT
D
0.796
SCHCODRAFT_84085
Schizophyllum commune
SCHCODRAFT_84085
I
0.796
SERLA73DRAFT_176077
Serpula lacrymans
SERLA73DRAFT_176077
I
0.796
Moror_257
Moniliophthora roreri
Moror_257
I
0.792
K443DRAFT_91011
Laccaria amethystina
K443DRAFT_91011
I
0.792
AGABI2DRAFT_189981
Agaricus bisporus
AGABI2DRAFT_189981
I
0.791
PILCRDRAFT_96544
Piloderma croceum
PILCRDRAFT_96544
I
0.778
CY34DRAFT_118166
Suillus luteus
CY34DRAFT_118166
I
0.772
SCLCIDRAFT_108969
Scleroderma citrinum
SCLCIDRAFT_108969
I
0.772
M413DRAFT_228760
Hebeloma cylindrosporum
M413DRAFT_228760
I
0.768
GALMADRAFT_294541
Galerina marginata
GALMADRAFT_294541
I
0.768
LACBIDRAFT_301763
Laccaria bicolor
LACBIDRAFT_301763
I
0.768
M404DRAFT_665352
Pisolithus tinctorius
M404DRAFT_665352
I
0.766
PAXRUDRAFT_131339
Paxillus rubicundulus
PAXRUDRAFT_131339
I
0.766
PISMIDRAFT_675973
Pisolithus microcarpus
PISMIDRAFT_675973
I
0.766
FOMPIDRAFT_1024333
Fomitopsis pinicola
FOMPIDRAFT_1024333
I
0.757