CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE30071
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE30071
T085089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00
PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN
PBM
Narasimhan et al.(2015)
pTH10623
0.824
0.941
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE30071
C2H2 ZF
121
143
CQCKVCGKEFSRQWLLQGHLRTH
CRE30071
C2H2 ZF
166
188
FQCEICCKRFADKSNLRAHVQTH
CRE30071
C2H2 ZF
194
215
HKCSRCGKSFALKSYLSKHEES
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy