CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM16
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000018965
T087960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.824
0.982
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.824
0.982
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.824
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000025245
C2H2 ZF
85
106
FRCDACDELFPSKLDLRRHKKY
ENSBTAP00000025245
C2H2 ZF
138
160
HECKDCERMFPTKYSLEQHMVVH
ENSBTAP00000025245
C2H2 ZF
166
188
YKCDQCPKAFNWKSNLIRHQMSH
ENSBTAP00000025245
C2H2 ZF
194
217
FECENCVKVFTDPSNLQRHIRSQH
ENSBTAP00000025245
C2H2 ZF
223
245
HACPDCGKTFATSSGLKQHKHIH
ENSBTAP00000025245
C2H2 ZF
251
273
FICEVCHKSYTQFSNLCRHKRMH
ENSBTAP00000025245
C2H2 ZF
280
301
IKCKDCGQMFSTTSSLNKHRRF
ENSBTAP00000025245
C2H2 ZF
806
828
YTCRYCGKIFPRSANLTRHLRTH
ENSBTAP00000025245
C2H2 ZF
834
857
YRCKYCDRSFSISSNLQRHVRNIH
ENSBTAP00000025245
C2H2 ZF
863
885
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy