CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF544
(
Callithrix jacchus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCJAG00000000329
T089180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF274
M04549_2.00
Homo sapiens
NVYGAGRACTCAYRYN
NRYRTGAGTYCTCRBN
SELEX
Yin et al.(2017)
ZNF274_eDBD_HT-SELEX
0.827
1.000
ZSCAN22
M08361_2.00
Homo sapiens
BNGCCTCCKCCVTCDSNC
GNSHGABGGMGGAGGCNV
ChIP-seq
Schmitges et al.(2016)
P10073_1-6.RCADE
0.823
0.984
ZNF8
M08401_2.00
Homo sapiens
NNBVYGGTAYGYCHHNDH
DHNDDGRCRTACCRBVNN
ChIP-seq
Schmitges et al.(2016)
P17098_1-6.RCADE
0.827
1.000
ZNF274
M07632_2.00
Homo sapiens
CWGTRTGARTTCTCW
WGAGAAYTCAYACWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF274.RCADE.ReprocessedData
0.827
1.000
ZSCAN22
M08261_2.00
Homo sapiens
CCTCCKCCMTCWGAC
GTCWGAKGGMGGAGG
ChIP-seq
Najafabadi et al.(2015b)
ZSCAN22
0.823
0.984
ZNF8
M07781_2.00
Homo sapiens
RYRTACCRCWKY
RMWGYGGTAYRY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF8.RCADE.OriginalMapping
0.827
1.000
ZNF8
M08961_2.00
Homo sapiens
TCCATTGTATGGATRTACCACA
TGTGGTAYATCCATACAATGGA
Misc
Kulakovskiy et al.(2013)
ZNF8_HUMAN.H11MO.0.C
0.827
1.000
ZNF274
M07933_2.00
Homo sapiens
YTTCTCHCCAGTRTGAR
YTCAYACTGGDGAGAAR
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ZNF274_UCD
0.827
1.000
ZSCAN22
M08935_2.00
Homo sapiens
CCKCCKCCMTCDSNYH
DRNSHGAKGGMGGMGG
Misc
Kulakovskiy et al.(2013)
ZSC22_HUMAN.H11MO.0.C
0.823
0.984
ZNF274
M07934_2.00
Homo sapiens
GGTTTYTCTCCAGTR
YACTGGAGARAAACC
ChIP-seq
Gerstein et al.(2012)
HepG2b_ZNF274_UCD
0.827
1.000
ZNF274
M07935_2.00
Homo sapiens
GAGAAYTCAYACTGG
CCAGTRTGARTTCTC
ChIP-seq
Gerstein et al.(2012)
K562b_ZNF274_UCD
0.827
1.000
ZNF274
M07936_2.00
Homo sapiens
TTYTCTCCAGTRTGA
TCAYACTGGAGARAA
ChIP-seq
Gerstein et al.(2012)
NT2-D1_ZNF274_UCD
0.827
1.000
ZNF274
M08916_2.00
Homo sapiens
TWNGRTTTCTYTCCAKTRTG
CAYAMTGGARAGAAAYCNWA
Misc
Kulakovskiy et al.(2013)
ZN274_HUMAN.H11MO.0.A
0.827
1.000
ZNF274
M04550_2.00
Homo sapiens
NVHGAGRACTCAYRYN
NRYRTGAGTYCTCDBN
SELEX
Yin et al.(2017)
ZNF274_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000000546
C2H2 ZF
270
292
SKCHECRKMFQSASALEAHQKTH
ENSCJAP00000000546
C2H2 ZF
298
320
YACIECGKAFSRSTHLAQHQVVH
ENSCJAP00000000546
C2H2 ZF
326
348
HECKECGKAFSRVTHLTQHQRIH
ENSCJAP00000000546
C2H2 ZF
354
376
YKCGECGKTFSRSTHLTQHQRVH
ENSCJAP00000000546
C2H2 ZF
382
404
YECDECGKAFSQSTHLTQHQRIH
ENSCJAP00000000546
C2H2 ZF
410
432
YKCDACGRAFSDCSALIRHLRIH
ENSCJAP00000000546
C2H2 ZF
438
460
YQCKVCPKAFAQSSSLIEHQRIH
ENSCJAP00000000546
C2H2 ZF
466
488
YKCSDCGKAFSRSSALMVHLRIH
ENSCJAP00000000548
C2H2 ZF
270
292
SKCHECRKMFQSASALEAHQKTH
ENSCJAP00000000548
C2H2 ZF
298
320
YACIECGKAFSRSTHLAQHQVVH
ENSCJAP00000000548
C2H2 ZF
326
348
HECKECGKAFSRVTHLTQHQRIH
ENSCJAP00000000548
C2H2 ZF
354
376
YKCGECGKTFSRSTHLTQHQRVH
ENSCJAP00000000548
C2H2 ZF
382
404
YECDECGKAFSQSTHLTQHQRIH
ENSCJAP00000000548
C2H2 ZF
410
432
YKCDACGRAFSDCSALIRHLRIH
ENSCJAP00000000548
C2H2 ZF
438
460
YQCKVCPKAFAQSSSLIEHQRIH
ENSCJAP00000000548
C2H2 ZF
466
488
YKCSDCGKAFSRSSALMVHLRIH
ENSCJAP00000000556
C2H2 ZF
257
279
YKCTDCGKSFNHNAHLTVHKRIH
ENSCJAP00000000556
C2H2 ZF
285
307
YMCKECGKAFSQNSSLVQHERIH
ENSCJAP00000000556
C2H2 ZF
313
335
YKCAECGKSFCHSTHLTVHRRIH
ENSCJAP00000000556
C2H2 ZF
341
363
YECQDCGRAFNQNSSLGRHKRTH
ENSCJAP00000000556
C2H2 ZF
369
391
YTCSVCGKSFSRTTCLFLHLRTH
ENSCJAP00000000556
C2H2 ZF
397
419
YECNHCGKGFRHSSSLAQHQRKH
ENSCJAP00000000558
C2H2 ZF
366
388
FECTQCGKSFSQSYDLVIHQRTH
ENSCJAP00000000558
C2H2 ZF
394
416
HECSLCGKSFTQSSKLRRHQRIH
ENSCJAP00000000558
C2H2 ZF
422
444
YHCIECRKSFRWNSNLIVHQRIH
ENSCJAP00000000558
C2H2 ZF
453
471
THCGRSFSQSSDFVAHKRT
ENSCJAP00000000558
C2H2 ZF
478
500
YKCTDCGKSFNHNAHLTVHKRIH
ENSCJAP00000000558
C2H2 ZF
506
528
YMCKECGKAFSQNSSLVQHERIH
ENSCJAP00000000558
C2H2 ZF
534
556
YKCAECGKSFCHSTHLTVHRRIH
ENSCJAP00000000558
C2H2 ZF
562
584
YECQDCGRAFNQNSSLGRHKRTH
ENSCJAP00000000558
C2H2 ZF
590
612
YTCSECGKAFSRVTHLTQHQRIH
ENSCJAP00000000558
C2H2 ZF
618
640
YKCGECGKTFSRSTHLTQHQRVH
ENSCJAP00000000558
C2H2 ZF
646
668
YECDECGKAFSQSTHLTQHQRIH
ENSCJAP00000000558
C2H2 ZF
674
696
YKCDACGRAFSDCSALIRHLRIH
ENSCJAP00000000576
C2H2 ZF
506
528
CRCSECGKIFRNPRYFSVHKKIH
ENSCJAP00000000576
C2H2 ZF
534
556
YVCQDCGKGFVQSSSLTQHQRVH
ENSCJAP00000000576
C2H2 ZF
562
584
FECQECGRTFNDRSAISQHLRTH
ENSCJAP00000000576
C2H2 ZF
590
612
YKCQDCGKAFRQSSHLIRHQRTH
ENSCJAP00000000576
C2H2 ZF
618
640
YACNKCGKAFTQSSHLIGHQRTH
ENSCJAP00000046364
C2H2 ZF
1
22
MCKECGKAFSQNSSLVQHERIH
ENSCJAP00000046364
C2H2 ZF
28
50
YKCAECGKSFCHSTHLTVHRRIH
ENSCJAP00000046364
C2H2 ZF
56
78
YECQDCGRAFNQNSSLGRHKRTH
ENSCJAP00000046364
C2H2 ZF
84
106
YTCSVCGKSFSRTTCLFLHLRTH
ENSCJAP00000046364
C2H2 ZF
112
134
YECNHCGKGFRHSSSLAQHQRKH
Links
Other
C2H2 ZF
family TFs
Other
Callithrix jacchus
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy