CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
si:dkey-26i24.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000102673
T091816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000133717
C2H2 ZF
72
98
TECNFSSKQRRKSFSQKLNLGVHMRVH
ENSDARP00000133717
C2H2 ZF
104
126
HTCEQCEKSFGKKRSLKTHMRIH
ENSDARP00000133717
C2H2 ZF
133
155
YTCQQCGKSFKQIGTLKGHMRIH
ENSDARP00000133717
C2H2 ZF
161
183
YTCQQCGKSFKQSATLKGHMRSH
ENSDARP00000133717
C2H2 ZF
189
211
YTCQQCGQSFYYAGNFAAHKRIH
ENSDARP00000133717
C2H2 ZF
217
239
YTCQQCGKSFKQSGTLKGHMRIH
ENSDARP00000133717
C2H2 ZF
243
263
KTLCGKSFAQKQKLDTHMTIH
ENSDARP00000133717
C2H2 ZF
269
291
YTCTECGKSFTCKSSLINHMKTH
ENSDARP00000133717
C2H2 ZF
297
319
FACNQCEKSFTCKANLMNHMDGH
ENSDARP00000133717
C2H2 ZF
325
347
FICDQCGKSLTRKDYIKQHMKTH
ENSDARP00000133717
C2H2 ZF
353
375
FRCSECGKSFKQKINLSAHMKLH
ENSDARP00000135684
C2H2 ZF
72
98
TECNFSSKQRRKSFSQKLNLGVHMRVH
ENSDARP00000135684
C2H2 ZF
104
126
HTCEQCEKSFGKKRSLKTHMRIH
ENSDARP00000135684
C2H2 ZF
132
154
YTCQQCGKSFKQIGTLKGHMRIH
ENSDARP00000135684
C2H2 ZF
160
182
YTCQQCGKSFKQIGTLKGHMRIH
ENSDARP00000135684
C2H2 ZF
188
210
YTCQQCGKSFKQSATLKGHMRSH
ENSDARP00000135684
C2H2 ZF
216
238
YTCQQCGQSFYYAGNFAAHKRIH
ENSDARP00000135684
C2H2 ZF
244
266
YTCQQCGKSFKQSGTLKGHMRIH
ENSDARP00000135684
C2H2 ZF
270
290
KTLCGKSFAQKQKLDTHMTIH
ENSDARP00000135684
C2H2 ZF
296
318
YTCTECGKSFTCKSSLINHMKTH
ENSDARP00000135684
C2H2 ZF
324
346
FACNQCEKSFTCKANLMNHMDGH
ENSDARP00000135684
C2H2 ZF
352
374
FICDQCGKSLTRKDYIKQHMKTH
ENSDARP00000135684
C2H2 ZF
380
402
FRCSECGKSFKQKINLSAHMKLH
ENSDARP00000139265
C2H2 ZF
72
98
TECNFSSKQRRKSFSQKLNLGVHMRVH
ENSDARP00000139265
C2H2 ZF
104
126
HTCEQCEKSFGKKRSLKTHMRIH
ENSDARP00000139265
C2H2 ZF
132
154
YTCQQCGKSFKQIGTLKGHMRIH
ENSDARP00000139265
C2H2 ZF
160
182
YTCQQCGKSFKQIGTLKGHMRIH
ENSDARP00000139265
C2H2 ZF
188
210
YTCQQCGKSFKQSATLKGHMRSH
ENSDARP00000139265
C2H2 ZF
216
238
YTCQQCGQSFYYAGNFAAHKRIH
ENSDARP00000139265
C2H2 ZF
244
266
YTCQQCGKSFKQSGTLKGHMRIH
ENSDARP00000139265
C2H2 ZF
270
290
KTLCGKSFAQKQKLDTHMTIH
ENSDARP00000139265
C2H2 ZF
296
318
YTCTECGKSFTCKSSLINHMKTH
ENSDARP00000139265
C2H2 ZF
324
346
FACNQCEKSFTCKANLMNHMDGH
ENSDARP00000139265
C2H2 ZF
352
374
FICDQCGKSLTRKDYIKQHMKTH
ENSDARP00000139265
C2H2 ZF
380
402
FRCSECGKSFKQKINLSAHMKLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cldn12
Xenopus tropicalis
XB-GENE-974236
N
0.827
zgc:174703
Danio rerio
ENSDARG00000103636
N
0.826
si:dkeyp-104f11.6
Danio rerio
ENSDARG00000089158
N
0.826
si:dkey-199m13.4
Danio rerio
ENSDARG00000103471
N
0.826
AAI57622
Xenopus tropicalis
AAI57622
N
0.823
zgc:173702
Danio rerio
ENSDARG00000103723
N
0.821
si:dkey-156k2.3
Danio rerio
ENSDARG00000090160
N
0.817
si:dkeyp-44b5.5
Danio rerio
ENSDARG00000102581
N
0.806
si:dkeyp-104f11.6
Danio rerio
ENSDARG00000105306
N
0.792
CABZ01033540.1
Danio rerio
ENSDARG00000101451
N
0.785
si:dkey-256i11.2
Danio rerio
ENSDARG00000093713
N
0.781