BCL6B (Dasypus novemcinctus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDNOG00000035586 T092337_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.821 0.974
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.821 0.974
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.821 0.974
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.821 0.974
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.821 0.974
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.812 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000032926 C2H2 ZF 323 345
ENSDNOP00000032926 C2H2 ZF 351 373
ENSDNOP00000032926 C2H2 ZF 379 401
ENSDNOP00000032926 C2H2 ZF 407 429
ENSDNOP00000032926 C2H2 ZF 435 458

Links

Other C2H2 ZF family TFs
Other Dasypus novemcinctus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP26872 Atta cephalotes ACEP26872 N 0.000
ENSTNIG00000019151 Tetraodon nigroviridis ENSTNIG00000019151 N 0.000
GB53258 Apis mellifera GB53258 N 0.000
MCINX007706 Melitaea cinxia MCINX007706 N 0.000
NEMVEDRAFT_v1g217135 Nematostella vectensis NEMVEDRAFT_v1g217135 N 0.000
NV23059 Nasonia vitripennis NV23059 N 0.000
SMAR015422 Strigamia maritima SMAR015422 N 0.000
Cflo_01956--FBpp0110265_DROME Camponotus floridanus Cflo_01956--FBpp0110265_DROME N 0.000
Hsal_09526--XP_395321.2_APIME Harpegnathos saltator Hsal_09526--XP_395321.2_APIME N 0.000