GFI1 (Equus caballus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSECAG00000006647 T093047_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GFI1
M00238_2.00
Homo sapiens
NWAWMNNNN

NNNNKWTWN
PBM
Barrera et al.(2016)
GFI1_REF
0.825 0.993
GFI1
M04507_2.00
Homo sapiens
BMAATCACDGCNHBBCACTMN

NKAGTGVVDNGCHGTGATTKV
SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX
0.825 0.993
Gfi1
M02668_2.00
Rattus norvegicus
NMAATCWVHS

SDBWGATTKN
SELEX
Mathelier et al.(2014)
MA0038.1
0.825 0.993
GFI1
M08905_2.00
Homo sapiens
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C
0.825 0.993
Gfi1
M08984_2.00
Mus musculus
MAATCWSWGY

RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C
0.825 0.993
GFI1
M10235_2.00
Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN

NNNVNNHAAATCWSDGYNNNNNNN
Transfac
Matys et al.(2006)
V$GFI1_01
0.825 0.993
GFI1
M10236_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1_Q6_01
0.825 0.993
GFI1
M04508_2.00
Homo sapiens
NNAGTGVVNHGCWSTGATTKV

BMAATCASWGCDNBBCACTNN
SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX
0.825 0.993
GFI1
M00236_2.00
Homo sapiens
NAATMNNNN

NNNNKATTN
PBM
Barrera et al.(2016)
GFI1_L400F
0.823 0.986
GFI1
M00237_2.00
Homo sapiens
ATATCAVD

HBTGATAT
PBM
Barrera et al.(2016)
GFI1_N382S
0.788 0.986
GFI1B
M00240_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_REF
0.783 0.884
GFI1B
M04523_2.00
Homo sapiens
NMAATCASDGCNNBBCACTNN

NNAGTGVVNNGCHSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX
0.783 0.884
GFI1B
M08909_2.00
Homo sapiens
MAATCWSDGY

RCHSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A
0.783 0.884
GFI1B
M10243_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_01
0.783 0.884
GFI1B
M10244_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_Q6
0.783 0.884
GFI1B
M04524_2.00
Homo sapiens
NMAATCASWGCDNNBCACTHN

NDAGTGVNNHGCWSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX
0.783 0.884
Gfi1b
M08098_2.00
Mus musculus
MAATCWCWGCH

DGCWGWGATTK
ChIP-seq
Mathelier et al.(2014)
MA0483.1
0.781 0.877
Gfi1b
M08977_2.00
Mus musculus
MAAYCACWGH

DCWGWGRTTK
Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A
0.781 0.877
Gfi1b
M09514_2.00
Mus musculus
MAATCWSWGC

GCWSWGATTK
Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178
0.781 0.877
sens-2
M06165_2.00
Drosophila melanogaster
RYAAATCWSDGCAYNC

GNRTGCHSWGATTTRY
B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632
0.774 0.848
GFI1B
M00239_2.00
Homo sapiens
NNAAATCWSDN

NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_A204T
0.773 0.877
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000004971 C2H2 ZF 261 284
ENSECAP00000004971 C2H2 ZF 290 312
ENSECAP00000004971 C2H2 ZF 318 340
ENSECAP00000004971 C2H2 ZF 346 368
ENSECAP00000004971 C2H2 ZF 374 396
ENSECAP00000004971 C2H2 ZF 402 425

Links

Other C2H2 ZF family TFs
Other Equus caballus TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Rfx7 Mus musculus ENSMUSG00000037674 D 0.000
RFX5 Homo sapiens ENSG00000143390 D 0.000
RFX7 Homo sapiens ENSG00000181827 D 0.000
ENSMMUP00000033587 Macaca fascicularis ENSMMUP00000033587 I 0.000
SINV24627 Solenopsis invicta SINV24627 I 0.000
PHUM035280 Pediculus humanus PHUM035280 I 0.000
NV23037 Nasonia vitripennis NV23037 I 0.000
NEMVEDRAFT_v1g25228 Nematostella vectensis NEMVEDRAFT_v1g25228 I 0.000
MCINX003210 Melitaea cinxia MCINX003210 I 0.000
L798_03377 Zootermopsis nevadensis L798_03377 I 0.000
KGM_16732 Danaus plexippus KGM_16732 I 0.000
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.000
ISCW001129 Ixodes scapularis ISCW001129 I 0.000
HMEL011744 Heliconius melpomene HMEL011744 I 0.000
Smp_040350 Schistosoma mansoni Smp_040350 I 0.000
SPU_027998 Strongylocentrotus purpuratus SPU_027998 I 0.000
Cmyd_10014217 Chelonia mydas Cmyd_10014217 I 0.000
Cflo_11342--XP_001120516.1_APIME Camponotus floridanus Cflo_11342--XP_001120516.1_APIME I 0.000
Brh_R008414 Buceros rhinoceros Brh_R008414 I 0.000
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I 0.000
Alligator_sinensis_CCG008945.1 Alligator sinensis Alligator_sinensis_CCG008945.1 I 0.000
Afo_R011605 Aptenodytes forsteri Afo_R011605 I 0.000
Afo_R007667 Aptenodytes forsteri Afo_R007667 I 0.000
Aan_R011989 Calypte anna Aan_R011989 I 0.000
Aan_R010941 Calypte anna Aan_R010941 I 0.000
tetur02g00620 Tetranychus urticae tetur02g00620 I 0.000
TC008959 Tribolium castaneum TC008959 I 0.000
GB49419 Apis mellifera GB49419 I 0.000
GE24099 Drosophila yakuba FBgn0241238 I 0.000
RFX7 Vicugna pacos ENSVPAG00000012402 I 0.000
RFX7 Tursiops truncatus ENSTTRG00000010051 I 0.000
RFX5 Tursiops truncatus ENSTTRG00000007023 I 0.000
ENSTSYG00000003230 Tarsius syrichta ENSTSYG00000003230 I 0.000
ENSTSYG00000002441 Tarsius syrichta ENSTSYG00000002441 I 0.000
rfx7 Takifugu rubripes ENSTRUG00000017897 I 0.000
RFX7 Takifugu rubripes ENSTRUG00000008008 I 0.000
ENSTRUG00000000177 Takifugu rubripes ENSTRUG00000000177 I 0.000
RFX7 Tetraodon nigroviridis ENSTNIG00000013706 I 0.000
rfx7 Tetraodon nigroviridis ENSTNIG00000009322 I 0.000
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I 0.000
RFX7 Taeniopygia guttata ENSTGUG00000006356 I 0.000
ENSXMAG00000003651 Xiphophorus maculatus ENSXMAG00000003651 I 0.000
ENSXMAG00000006676 Xiphophorus maculatus ENSXMAG00000006676 I 0.000
GK13786 Drosophila willistoni FBgn0215794 I 0.000
GJ22650 Drosophila virilis FBgn0209754 I 0.000
GD19544 Drosophila simulans FBgn0191039 I 0.000
GM10553 Drosophila sechellia FBgn0165499 I 0.000
GL22063 Drosophila persimilis FBgn0159655 I 0.000
GI24583 Drosophila mojavensis FBgn0147305 I 0.000
GH18082 Drosophila grimshawi FBgn0125550 I 0.000
GG10435 Drosophila erecta FBgn0102744 I 0.000
GF16654 Drosophila ananassae FBgn0093675 I 0.000
GA21990 Drosophila pseudoobscura FBgn0081975 I 0.000
CG9727 Drosophila melanogaster FBgn0037445 I 0.000
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I 0.000
RFX5 Tupaia belangeri ENSTBEG00000006419 I 0.000
TTAC_0000027401 Hydatigera taeniaeformis TTAC_0000027401 I 0.000
ASTEI04100 Anopheles stephensi ASTEI04100 I 0.000
ASIS020285 Anopheles sinensis ASIS020285 I 0.000
AQUA006870 Anopheles quadriannulatus AQUA006870 I 0.000
AMIN003942 Anopheles minimus AMIN003942 I 0.000
AMEM009524 Anopheles merus AMEM009524 I 0.000
AMEC002251 Anopheles melas AMEC002251 I 0.000
AFUN011072 Anopheles funestus AFUN011072 I 0.000
AFAF011654 Anopheles farauti AFAF011654 I 0.000
AEPI006624 Anopheles epiroticus AEPI006624 I 0.000
ADIR010232 Anopheles dirus ADIR010232 I 0.000
ACUA017169 Anopheles culicifacies ACUA017169 I 0.000
MDOA009335 Musca domestica MDOA009335 I 0.000
A_01977 Schistosoma haematobium A_01977 I 0.000
csin102559 Clonorchis sinensis csin102559 I 0.000
TsM_000553100 Taenia solium TsM_000553100 I 0.000
T265_11740 Opisthorchis viverrini T265_11740 I 0.000
SROB_0001335501 Schistosoma rodhaini SROB_0001335501 I 0.000
SCUD_0001838101 Schistosoma curassoni SCUD_0001838101 I 0.000
HNAJ_0001122601 Hymenolepis nana HNAJ_0001122601 I 0.000
HmN_000672900 Hymenolepis microstoma HmN_000672900 I 0.000
HDID_0000095701 Hymenolepis diminuta HDID_0000095701 I 0.000
EmuJ_001055400 Echinococcus multilocularis EmuJ_001055400 I 0.000
ECPE_0001841201 Echinostoma caproni ECPE_0001841201 I 0.000
ECANG7_06078 Echinococcus canadensis ECANG7_06078 I 0.000
D915_00887 Fasciola hepatica D915_00887 I 0.000
ACOM036649 Anopheles coluzzii ACOM036649 I 0.000
ACHR008891 Anopheles christyi ACHR008891 I 0.000
Pvit_17399 Pogona vitticeps Pvit_17399 I 0.000
Pvit_04986 Pogona vitticeps Pvit_04986 I 0.000
Ogr13052 Ophisaurus gracilis Ogr13052 I 0.000
Ogr11408 Ophisaurus gracilis Ogr11408 I 0.000
Myotis_brandtii_RFX7_10006263 Myotis brandtii Myotis_brandtii_RFX7_10006263 I 0.000
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I 0.000
Hsal_12778--XP_001120516.1_APIME Harpegnathos saltator Hsal_12778--XP_001120516.1_APIME I 0.000
Gfo_R004305 Geospiza fortis Gfo_R004305 I 0.000
Gfo_R003263 Geospiza fortis Gfo_R003263 I 0.000
ENSP00000397644-D1 Bos grunniens ENSP00000397644-D1 I 0.000
ENSP00000389130 Macaca fascicularis ENSP00000389130 I 0.000
e_gw.237.152.1 Branchiostoma floridae e_gw.237.152.1 I 0.000
Ocbimv22017482m.g Octopus bimaculoides Ocbimv22017482m.g I 0.000
CLEC011984 Cimex lectularius CLEC011984 I 0.000
AATE016751 Anopheles atroparvus AATE016751 I 0.000
AARA004226 Anopheles arabiensis AARA004226 I 0.000
AALB008384 Anopheles albimanus AALB008384 I 0.000
XP_002167798.1 Hydra magnipapillata XP_002167798.1 I 0.000
rfx5.S Xenopus laevis XB-GENE-6079297 I 0.000
rfx5 Xenopus tropicalis XB-GENE-5942579 I 0.000
rfx7 Xenopus tropicalis XB-GENE-1008447 I 0.000
SMU15027042 Schmidtea mediterranea SMU15027042 I 0.000
Sjc_0019090 Schistosoma japonicum Sjc_0019090 I 0.000
LDEC011897 Leptinotarsa decemlineata LDEC011897 I 0.000
LCUP014592 Lucilia cuprina LCUP014592 I 0.000
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I 0.000
RFX5 Loxodonta africana ENSLAFG00000030906 I 0.000
RFX5 Echinops telfairi ENSETEG00000013503 I 0.000
RFX7 Erinaceus europaeus ENSEEUG00000013718 I 0.000
RFX5 Erinaceus europaeus ENSEEUG00000010785 I 0.000
RFX5 Equus caballus ENSECAG00000024774 I 0.000
RFX7 Equus caballus ENSECAG00000002379 I 0.000
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I 0.000
RFX7 Dasypus novemcinctus ENSDNOG00000044983 I 0.000
RFX7 Danio rerio ENSDARG00000103691 I 0.000
rfx7 Danio rerio ENSDARG00000077237 I 0.000
rfx5 Danio rerio ENSDARG00000063258 I 0.000
ENSCSAG00000011819 Chlorocebus sabaeus ENSCSAG00000011819 I 0.000
RFX7 Echinops telfairi ENSETEG00000015037 I 0.000
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I 0.000
RFX7 Loxodonta africana ENSLAFG00000018745 I 0.000
ENSLACG00000015878 Latimeria chalumnae ENSLACG00000015878 I 0.000
ENSGMOG00000004164 Gadus morhua ENSGMOG00000004164 I 0.000
ENSGMOG00000002477 Gadus morhua ENSGMOG00000002477 I 0.000
RFX5 Gorilla gorilla ENSGGOG00000016795 I 0.000
RFX5 Gallus gallus ENSGALG00000000836 I 0.000
rfx7 Gasterosteus aculeatus ENSGACG00000015838 I 0.000
RFX7 Gasterosteus aculeatus ENSGACG00000006090 I 0.000
RFX7 Felis catus ENSFCAG00000029408 I 0.000
RFX5 Felis catus ENSFCAG00000005568 I 0.000
ENSFALG00000012087 Ficedula albicollis ENSFALG00000012087 I 0.000
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I 0.000
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I 0.000
ENSCPOG00000005366 Cavia porcellus ENSCPOG00000005366 I 0.000
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I 0.000
RFX7 Anolis carolinensis ENSACAG00000008482 I 0.000
DAPPUDRAFT_64123 Daphnia pulex DAPPUDRAFT_64123 I 0.000
CPIJ006094 Culex quinquefasciatus CPIJ006094 I 0.000
CGI_10006904 Crassostrea gigas CGI_10006904 I 0.000
CapteG131555 Capitella teleta CapteG131555 I 0.000
BGIBMGA007758 Bombyx mori BGIBMGA007758 I 0.000
AGAP013226 Anopheles gambiae AGAP013226 I 0.000
ADAC008404 Anopheles darlingi ADAC008404 I 0.000
ACEP24602 Atta cephalotes ACEP24602 I 0.000
AAEL013752 Aedes aegypti AAEL013752 I 0.000
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I 0.000
ENSAMEG00000018368 Ailuropoda melanoleuca ENSAMEG00000018368 I 0.000
RFX5 Callithrix jacchus ENSCJAG00000007482 I 0.000
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I 0.000
RFX7 Choloepus hoffmanni ENSCHOG00000003451 I 0.000
RFX7 Canis familiaris ENSCAFG00000016029 I 0.000
RFX5 Canis familiaris ENSCAFG00000012661 I 0.000
RFX5 Bos taurus ENSBTAG00000017580 I 0.000
RFX7 Bos taurus ENSBTAG00000000565 I 0.000
ENSAPLG00000005911 Anas platyrhynchos ENSAPLG00000005911 I 0.000
ENSAMXG00000020093 Astyanax mexicanus ENSAMXG00000020093 I 0.000
ENSAMXG00000014807 Astyanax mexicanus ENSAMXG00000014807 I 0.000
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I 0.000
CpipJ_CPIJ006094 Culex pipiens CpipJ_CPIJ006094 I 0.000
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I 0.000
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I 0.000
ENSPSIG00000014731 Pelodiscus sinensis ENSPSIG00000014731 I 0.000
ENSPPYG00000006502 Pongo abelii ENSPPYG00000006502 I 0.000
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I 0.000
ENSPMAG00000005066 Petromyzon marinus ENSPMAG00000005066 I 0.000
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I 0.000
ENSPFOG00000002938 Poecilia formosa ENSPFOG00000002938 I 0.000
RFX5 Procavia capensis ENSPCAG00000011056 I 0.000
RFX7 Procavia capensis ENSPCAG00000004974 I 0.000
ENSPANG00000017297 Papio anubis ENSPANG00000017297 I 0.000
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I 0.000
rfx7 Oryzias latipes ENSORLG00000008583 I 0.000
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I 0.000
RFX5 Pan troglodytes ENSPTRG00000001286 I 0.000
ENSSSCG00000024042 Sus scrofa ENSSSCG00000024042 I 0.000
RFX5 Sus scrofa ENSSSCG00000006625 I 0.000
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I 0.000
ENSSHAG00000003875 Sarcophilus harrisii ENSSHAG00000003875 I 0.000
RFX7 Sorex araneus ENSSARG00000010801 I 0.000
RFX5 Sorex araneus ENSSARG00000000750 I 0.000
Rfx7 Rattus norvegicus ENSRNOG00000060367 I 0.000
Rfx5 Rattus norvegicus ENSRNOG00000021012 I 0.000
RFX5 Pteropus vampyrus ENSPVAG00000011680 I 0.000
RFX7 Pteropus vampyrus ENSPVAG00000005381 I 0.000
RFX7 Pan troglodytes ENSPTRG00000007104 I 0.000
RFX7 Oryzias latipes ENSORLG00000005342 I 0.000
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I 0.000
ENSONIG00000008334 Oreochromis niloticus ENSONIG00000008334 I 0.000
ENSMPUG00000002204 Mustela putorius furo ENSMPUG00000002204 I 0.000
RFX5 Monodelphis domestica ENSMODG00000018866 I 0.000
RFX7 Monodelphis domestica ENSMODG00000008136 I 0.000
RFX7 Macaca mulatta ENSMMUG00000017801 I 0.000
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I 0.000
RFX7 Myotis lucifugus ENSMLUG00000028676 I 0.000
RFX5 Myotis lucifugus ENSMLUG00000015218 I 0.000
RFX7 Meleagris gallopavo ENSMGAG00000005745 I 0.000
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I 0.000
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I 0.000
ENSMEUG00000007846 Macropus eugenii ENSMEUG00000007846 I 0.000
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I 0.000
Rfx5 Mus musculus ENSMUSG00000005774 I 0.000
ENSONIG00000005780 Oreochromis niloticus ENSONIG00000005780 I 0.000
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I 0.000
RFX7 Otolemur garnettii ENSOGAG00000031795 I 0.000
RFX5 Otolemur garnettii ENSOGAG00000008120 I 0.000
RFX7 Oryctolagus cuniculus ENSOCUG00000013678 I 0.000
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I 0.000
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I 0.000
ENSOARG00000020885 Ovis aries ENSOARG00000020885 I 0.000
RFX7 Ornithorhynchus anatinus ENSOANG00000008526 I 0.000
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I 0.000
ENSNLEG00000006658 Nomascus leucogenys ENSNLEG00000006658 I 0.000
ENSLOCG00000013505 Lepisosteus oculatus ENSLOCG00000013505 I 0.000