ZNF250 (Echinops telfairi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSETEG00000012126 T093989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF250
M08264_2.00 		Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR		 ChIP-seq
Najafabadi et al.(2015b)
ZNF250 		0.801 0.953
ZNF250
M04619_2.00 		Homo sapiens
NYASGCCYAY
RTRGGCSTRN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX 		0.801 0.953
ZNF250
M08370_2.00 		Homo sapiens
CYYTGCAGB
VCTGCARRG		 ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE 		0.801 0.953
ZNF250
M08944_2.00 		Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA		 Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C 		0.801 0.953
ZNF250
M04620_2.00 		Homo sapiens
NTAGGCCTAN
NTAGGCCTAN		 SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX 		0.801 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000009845 C2H2 ZF 199 221
ENSETEP00000009845 C2H2 ZF 227 249
ENSETEP00000009845 C2H2 ZF 255 277
ENSETEP00000009845 C2H2 ZF 283 305
ENSETEP00000009845 C2H2 ZF 311 333
ENSETEP00000009845 C2H2 ZF 339 361
ENSETEP00000009845 C2H2 ZF 367 389
ENSETEP00000009845 C2H2 ZF 395 417
ENSETEP00000009845 C2H2 ZF 423 445
ENSETEP00000009845 C2H2 ZF 451 473
ENSETEP00000009845 C2H2 ZF 479 501
ENSETEP00000009845 C2H2 ZF 507 529
ENSETEP00000009845 C2H2 ZF 535 557

Links

Other C2H2 ZF family TFs
Other Echinops telfairi TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action