ENSLACG00000017707 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000017707 T097167_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.756 0.895
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.756 0.895
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.756 0.895
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.756 0.895
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.756 0.895
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.756 0.895
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.756 0.895
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.756 0.895
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.756 0.895
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.756 0.895
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.756 0.895
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.756 0.895
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000020148 C2H2 ZF 117 139
ENSLACP00000020148 C2H2 ZF 148 170
ENSLACP00000020148 C2H2 ZF 174 196
ENSLACP00000020148 C2H2 ZF 202 224
ENSLACP00000020148 C2H2 ZF 230 251

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000003607 Pelodiscus sinensis ENSPSIG00000003607 I 0.823
Cmyd_10017446 Chelonia mydas Cmyd_10017446 I 0.823
snai1 Xenopus tropicalis XB-GENE-479970 I 0.822
snai1.S Xenopus laevis XB-GENE-865328 I 0.820
SNAI1 Anolis carolinensis ENSACAG00000015607 N 0.813
Pvit_03333 Pogona vitticeps Pvit_03333 N 0.813
Ogr08528 Ophisaurus gracilis Ogr08528 N 0.813
Alligator_sinensis_CCG001703.1 Alligator sinensis Alligator_sinensis_CCG001703.1 I 0.812
SNAI1 Meleagris gallopavo ENSMGAG00000009447 N 0.811
SNAI1 Gallus gallus ENSGALG00000008018 N 0.811
Gfo_R009598 Geospiza fortis Gfo_R009598 N 0.811
SNAI1 Taeniopygia guttata ENSTGUG00000008724 N 0.811
ENSFALG00000012974 Ficedula albicollis ENSFALG00000012974 N 0.811
Afo_R003266 Aptenodytes forsteri Afo_R003266 N 0.811
Aan_R003278 Calypte anna Aan_R003278 N 0.811
ENSAPLG00000014633 Anas platyrhynchos ENSAPLG00000014633 N 0.811
SNAI1 Ornithorhynchus anatinus ENSOANG00000008681 N 0.808
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.756
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.756
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.756
SNAI2 Equus caballus ENSECAG00000010120 I 0.756
SNAI2 Felis catus ENSFCAG00000015779 I 0.756
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.756
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.756
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.756
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.756
SNAI2 Bos taurus ENSBTAG00000013227 I 0.756
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.756
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.756
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.756
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.756
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.756
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.756
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.756
Snai2 Mus musculus ENSMUSG00000022676 D 0.756
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.756
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.756
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.756
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.756
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.756
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.756
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.756
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.756
SNAI2 Homo sapiens ENSG00000019549 D 0.756
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.756
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.756
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.756
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.756
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.756
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.756