CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Zfp335
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000039834
T101157_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in brain development and positive regulation of neuroblast proliferation. Acts upstream of or within several processes, including in utero embryonic development; nervous system development; and regulation of histone H3-K4 methylation. Located in nucleus. Part of histone methyltransferase complex. Is expressed in brain and future brain. Human ortholog(s) of this gene implicated in primary autosomal recessive microcephaly 10. Orthologous to human ZNF335 (zinc finger protein 335). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zfp335
M08998_2.00
Mus musculus
RGSTGYCYNNNSHDNTGCCTGH
DCAGGCANHDSNNNRGRCASCY
Misc
Kulakovskiy et al.(2013)
ZN335_MOUSE.H11MO.0.A
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF335
M08952_2.00
Homo sapiens
RGSTGYCYNNNSHDNTGCCTGH
DCAGGCANHDSNNNRGRCASCY
Misc
Kulakovskiy et al.(2013)
ZN335_HUMAN.H11MO.0.A
0.814
0.970
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000038298
C2H2 ZF
496
518
FRCLQCSYRSRRWSSLKEHMFNH
ENSMUSP00000038298
C2H2 ZF
524
546
YKCDECSYTSVYRKDVIRHAAVH
ENSMUSP00000038298
C2H2 ZF
563
585
FPCPVCGRVYPMQKRLTQHMKTH
ENSMUSP00000038298
C2H2 ZF
591
613
HMCDKCGKSFKKRYTFKMHLLTH
ENSMUSP00000038298
C2H2 ZF
622
644
FKCEFCEFVCEDKKALLNHQLSH
ENSMUSP00000038298
C2H2 ZF
679
702
FACEYCHFSTRHKKNLRLHVRCRH
ENSMUSP00000038298
C2H2 ZF
1019
1041
FSCKVCSEAFPSRAEMESHKRAH
ENSMUSP00000038298
C2H2 ZF
1047
1069
FKCPDCPFSARQWPEVRAHMAQH
ENSMUSP00000038298
C2H2 ZF
1075
1097
HQCNQCSFASKNKKDLRRHMLTH
ENSMUSP00000038298
C2H2 ZF
1103
1126
FSCHVCGQRFNRNGHLKFHIQRLH
ENSMUSP00000139133
C2H2 ZF
496
518
FRCLQCSYRSRRWSSLKEHMFNH
ENSMUSP00000139133
C2H2 ZF
524
546
YKCDECSYTSVYRKDVIRHAAVH
ENSMUSP00000139133
C2H2 ZF
563
585
FPCPVCGRVYPMQKRLTQHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy