Zscan4d (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000090714 T101558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zscan4c
M00147_2.00
Mus musculus
NNTGTGCNN

NNGCACANN
PBM
Badis et al.(2009)
Gm397_1753
0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000066504 C2H2 ZF 395 417
ENSMUSP00000066504 C2H2 ZF 425 446
ENSMUSP00000066504 C2H2 ZF 452 474
ENSMUSP00000066504 C2H2 ZF 480 503
ENSMUSP00000131258 C2H2 ZF 395 417
ENSMUSP00000131258 C2H2 ZF 425 446
ENSMUSP00000131258 C2H2 ZF 452 474
ENSMUSP00000131258 C2H2 ZF 480 503

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30148.m001468 Ricinus communis 30148.m001468 N 0.000
AMTR_s00011p00266100 Amborella trichopoda AMTR_s00011p00266100 N 0.000
Aquca_052_00048 Aquilegia coerulea Aquca_052_00048 N 0.000
SIGA Arabidopsis thaliana AT1G64860 N 0.000
BGIOSGA028041 Oryza indica BGIOSGA028041 N 0.000
Bo2g097550 Brassica oleracea Bo2g097550 N 0.000
Bostr.10180s0008 Boechera stricta Bostr.10180s0008 N 0.000
Bra008513 Brassica rapa Bra008513 N 0.000
BRADI3G16040 Brachypodium distachyon BRADI3G16040 N 0.000
Cagra.2194s0001 Capsella grandiflora Cagra.2194s0001 N 0.000
Carubv10020145m.g Capsella rubella Carubv10020145m.g N 0.000
cassava13701.valid.m1 Manihot esculenta cassava13701.valid.m1 N 0.000
cassava13702.valid.m1 Manihot esculenta cassava13702.valid.m1 N 0.000
cassava41980.valid.m1 Manihot esculenta cassava41980.valid.m1 N 0.000
Ca_22622 Cicer arietinum Ca_22622 N 0.000
Ca_22625 Cicer arietinum Ca_22625 N 0.000
chr3.CM0127.660.nc Lotus japonicus chr3.CM0127.660.nc N 0.000
Ciclev10031289m.g Citrus clementina Ciclev10031289m.g N 0.000
Cla006897 Citrullus lanatus Cla006897 N 0.000
Cucsa.073340 Cucumis sativus Cucsa.073340 N 0.000
Eucgr.A02994 Eucalyptus grandis Eucgr.A02994 N 0.000
evm.TU.supercontig_3807.1 Carica papaya evm.TU.supercontig_3807.1 N 0.000
F775_32229 Aegilops tauschii F775_32229 N 0.000
gene12547-v1.0-hybrid Fragaria vesca gene12547-v1.0-hybrid N 0.000
GLYMA09G35750 Glycine max GLYMA09G35750 N 0.000
GLYMA12G01600 Glycine max GLYMA12G01600 N 0.000
Gorai.004G255000 Gossypium raimondii Gorai.004G255000 N 0.000
Gorai.007G247500 Gossypium raimondii Gorai.007G247500 N 0.000
GRMZM2G006736 Zea mays GRMZM2G006736 N 0.000
GRMZM2G543629 Zea mays GRMZM2G543629 N 0.000
GSMUA_Achr11G08010_001 Musa acuminata GSMUA_Achr11G08010_001 N 0.000
GSMUA_Achr1G10700_001 Musa acuminata GSMUA_Achr1G10700_001 N 0.000
LPERR08G03850 Leersia perrieri LPERR08G03850 N 0.000
MDP0000934360 Malus domestica MDP0000934360 N 0.000
MDP0000939377 Malus domestica MDP0000939377 N 0.000
mgf004750m Mimulus guttatus mgf004750m N 0.000
mgf016433m Mimulus guttatus mgf016433m N 0.000
MTR_0172s0030 Medicago truncatula MTR_0172s0030 N 0.000
OBART08G03910 Oryza barthii OBART08G03910 N 0.000
OGLUM08G04010 Oryza glumaepatula OGLUM08G04010 N 0.000
OLONG_000145 Oryza longistaminata OLONG_000145 N 0.000
OMERI08G04040 Oryza meridionalis OMERI08G04040 N 0.000
ONIVA08G03880 Oryza nivara ONIVA08G03880 N 0.000
OPUNC08G03810 Oryza punctata OPUNC08G03810 N 0.000
orange1.1g010521m.g Citrus sinensis orange1.1g010521m.g N 0.000
ORGLA08G0033200 Oryza glaberrima ORGLA08G0033200 N 0.000
ORUFI08G04310 Oryza rufipogon ORUFI08G04310 N 0.000
OS08G0163400 Oryza sativa OS08G0163400 N 0.000
Pavir.Fb00544 Panicum virgatum Pavir.Fb00544 N 0.000
Pavir.J39657 Panicum virgatum Pavir.J39657 N 0.000
PDK_20s1319221g002 Phoenix dactylifera PDK_20s1319221g002 N 0.000
PGSC0003DMG400026491 Solanum tuberosum PGSC0003DMG400026491 N 0.000
PGSC0003DMG400027038 Solanum tuberosum PGSC0003DMG400027038 N 0.000
PK03826.1 Cannabis sativa PK03826.1 N 0.000
Pm019567 Prunus mume Pm019567 N 0.000
POPTR_0013s07290 Populus trichocarpa POPTR_0013s07290 N 0.000
POPTR_0019s06020 Populus trichocarpa POPTR_0019s06020 N 0.000
PRUPE_ppa004393mg Prunus persica PRUPE_ppa004393mg N 0.000
SapurV1A.0592s0030 Salix purpurea SapurV1A.0592s0030 N 0.000
SapurV1A.1326s0010 Salix purpurea SapurV1A.1326s0010 N 0.000
SapurV1A.1456s0040 Salix purpurea SapurV1A.1456s0040 N 0.000
Sb07g004340 Sorghum bicolor Sb07g004340 N 0.000
SIGA Arabidopsis lyrata scaffold_200883.1 N 0.000
Si013608m.g Setaria italica Si013608m.g N 0.000
Solyc03g097320.2 Solanum lycopersicum Solyc03g097320.2 N 0.000
Solyc06g072710.2 Solanum lycopersicum Solyc06g072710.2 N 0.000
TCM_025640 Theobroma cacao TCM_025640 N 0.000
Thhalv10002486m.g Eutrema salsugineum Thhalv10002486m.g N 0.000
Traes_7AL_33A778289 Triticum aestivum Traes_7AL_33A778289 N 0.000
Traes_7BL_0D553E505 Triticum aestivum Traes_7BL_0D553E505 N 0.000
Traes_7DL_21A260D0C Triticum aestivum Traes_7DL_21A260D0C N 0.000
TRIUR3_34525 Triticum urartu TRIUR3_34525 N 0.000
SIGA Vitis vinifera VIT_16s0039g00660 N 0.000