CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSNLEG00000001430
(
Nomascus leucogenys
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSNLEG00000001430
T101666_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.827
0.993
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.827
0.993
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.827
0.993
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.827
0.993
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.827
0.993
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.827
0.993
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.827
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSNLEP00000001671
C2H2 ZF
178
200
FECSECGKVFSKSSTLNKHQKIH
ENSNLEP00000001671
C2H2 ZF
216
238
YECRECGKAFHQSTHLIHHQRIH
ENSNLEP00000001671
C2H2 ZF
244
266
YECKECGKAFSVSSSLTYHQKIH
ENSNLEP00000001671
C2H2 ZF
272
294
FECNLCGKAFIRNIHLAHHHRIH
ENSNLEP00000001671
C2H2 ZF
300
322
FKCNICEKAFVCRAHLTKHQNIH
ENSNLEP00000001671
C2H2 ZF
328
350
YKCNECGKAFNQSTSFLQHQRIH
ENSNLEP00000001671
C2H2 ZF
356
378
FECNECGKAFRVNSSLTEHQRIH
ENSNLEP00000001671
C2H2 ZF
384
406
YKCNECGKAFRDNSSFARHRKIH
ENSNLEP00000001671
C2H2 ZF
412
434
YRCGLCEKAFRDQSALAQHQRIH
ENSNLEP00000001671
C2H2 ZF
440
462
YTCNICEKAFSDHSALTQHKRIH
ENSNLEP00000001671
C2H2 ZF
468
490
YKCKICGKGFIRSTHLTQHQRIH
ENSNLEP00000001671
C2H2 ZF
496
518
YKCNKCGKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Nomascus leucogenys
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy