CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Oryctolagus cuniculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOCUG00000029378
T103275_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.818
0.980
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.818
0.980
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.818
0.980
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.771
0.916
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000027080
C2H2 ZF
172
194
YKCSMCEKTFINTSSLRKHEKNH
ENSOCUP00000027080
C2H2 ZF
200
222
FKCKECSKAFSQSSALIQHQITH
ENSOCUP00000027080
C2H2 ZF
228
250
YVCKECGKAFTLSTSLYKHLRTH
ENSOCUP00000027080
C2H2 ZF
256
278
YRCKECGKAFSRRSGLFIHQKIH
ENSOCUP00000027080
C2H2 ZF
312
334
YSCNECGNSFKSSSSLRYHQRIH
ENSOCUP00000027080
C2H2 ZF
340
362
FKCSECGRAFSQSASLIQHERIH
ENSOCUP00000027080
C2H2 ZF
368
390
YRCNECGKGFTSISRLNRHRIIH
ENSOCUP00000027080
C2H2 ZF
396
418
YNCSECGKALSSHSTLIIHERIH
ENSOCUP00000027080
C2H2 ZF
424
446
CKCKVCGKAFRQSSALIQHQRMH
ENSOCUP00000027080
C2H2 ZF
452
474
YKCNECGKTFRCNSSLSNHQRIH
ENSOCUP00000027080
C2H2 ZF
480
502
YRCEECGISFGQSSALIQHRRIH
ENSOCUP00000027080
C2H2 ZF
508
530
FKCNTCGKTFRQSSSRIAHQRIH
ENSOCUP00000027080
C2H2 ZF
536
558
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Oryctolagus cuniculus
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy