ENSONIG00000011060 (Oreochromis niloticus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSONIG00000011060 T104148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.817 0.982
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.817 0.982
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.811 0.947
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.811 0.947
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.811 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSONIP00000013922 C2H2 ZF 403 424
ENSONIP00000013922 C2H2 ZF 430 452
ENSONIP00000013922 C2H2 ZF 749 771
ENSONIP00000013922 C2H2 ZF 777 799
ENSONIP00000013922 C2H2 ZF 807 830
ENSONIP00000013923 C2H2 ZF 365 386
ENSONIP00000013923 C2H2 ZF 392 414
ENSONIP00000013923 C2H2 ZF 711 733
ENSONIP00000013923 C2H2 ZF 739 761
ENSONIP00000013923 C2H2 ZF 769 792

Links

Other C2H2 ZF family TFs
Other Oreochromis niloticus TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GF18430 Drosophila ananassae FBgn0095448 I 0.000
GG17396 Drosophila erecta FBgn0109622 I 0.000
Rel Drosophila melanogaster FBgn0014018 D 0.000
GI10193 Drosophila mojavensis FBgn0132959 I 0.000
GL12490 Drosophila persimilis FBgn0150096 I 0.000
GA11317 Drosophila pseudoobscura FBgn0071371 I 0.000
Rel Drosophila sechellia FBgn0069546 I 0.000
Rel Drosophila simulans FBgn0029245 I 0.000
GJ23481 Drosophila virilis FBgn0210579 I 0.000
GK14061 Drosophila willistoni FBgn0216067 I 0.000
Rel Drosophila yakuba FBgn0029191 I 0.000
LCUP017746 Lucilia cuprina LCUP017746 I 0.000
MDOA004895 Musca domestica MDOA004895 I 0.000