ENSPPYG00000010493 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000010493 T107051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF274
M04549_2.00 		Homo sapiens
NVYGAGRACTCAYRYN
NRYRTGAGTYCTCRBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_HT-SELEX 		0.827 1.000
ZNF274
M07632_2.00 		Homo sapiens
CWGTRTGARTTCTCW
WGAGAAYTCAYACWG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF274.RCADE.ReprocessedData 		0.827 1.000
ZNF274
M07933_2.00 		Homo sapiens
YTTCTCHCCAGTRTGAR
YTCAYACTGGDGAGAAR		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ZNF274_UCD 		0.827 1.000
ZNF274
M07934_2.00 		Homo sapiens
GGTTTYTCTCCAGTR
YACTGGAGARAAACC		 ChIP-seq
Gerstein et al.(2012)
HepG2b_ZNF274_UCD 		0.827 1.000
ZNF274
M07935_2.00 		Homo sapiens
GAGAAYTCAYACTGG
CCAGTRTGARTTCTC		 ChIP-seq
Gerstein et al.(2012)
K562b_ZNF274_UCD 		0.827 1.000
ZNF274
M07936_2.00 		Homo sapiens
TTYTCTCCAGTRTGA
TCAYACTGGAGARAA		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_ZNF274_UCD 		0.827 1.000
ZNF274
M08916_2.00 		Homo sapiens
TWNGRTTTCTYTCCAKTRTG
CAYAMTGGARAGAAAYCNWA		 Misc
Kulakovskiy et al.(2013)
ZN274_HUMAN.H11MO.0.A 		0.827 1.000
ZNF274
M04550_2.00 		Homo sapiens
NVHGAGRACTCAYRYN
NRYRTGAGTYCTCDBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000011760 C2H2 ZF 508 530
ENSPPYP00000011760 C2H2 ZF 536 558
ENSPPYP00000011760 C2H2 ZF 564 586
ENSPPYP00000011760 C2H2 ZF 592 614
ENSPPYP00000011760 C2H2 ZF 620 642

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000741 Ricinus communis 29814.m000741 I 0.000
29900.m001628 Ricinus communis 29900.m001628 I 0.000
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.000
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.000
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.000
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.000
Bo5g136850 Brassica oleracea Bo5g136850 I 0.000
Bo6g075950 Brassica oleracea Bo6g075950 I 0.000
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.000
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.000
Bra003346 Brassica rapa Bra003346 I 0.000
Bra034165 Brassica rapa Bra034165 I 0.000
Bra034866 Brassica rapa Bra034866 I 0.000
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.000
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.000
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.000
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.000
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.000
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.000
Ca_19877 Cicer arietinum Ca_19877 I 0.000
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.000
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.000
Cla002288 Citrullus lanatus Cla002288 I 0.000
Cla015773 Citrullus lanatus Cla015773 I 0.000
Cla019967 Citrullus lanatus Cla019967 I 0.000
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.000
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.000
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.000
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.000
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.000
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.000
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.000
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.000
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.000
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.000
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.000
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.000
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.000
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.000
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.000
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.000
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.000
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.000
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.000
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.000
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.000
MDP0000097759 Malus domestica MDP0000097759 N 0.000
MDP0000301451 Malus domestica MDP0000301451 I 0.000
MDP0000943251 Malus domestica MDP0000943251 N 0.000
mgf001239m Mimulus guttatus mgf001239m N 0.000
mgf006505m Mimulus guttatus mgf006505m I 0.000
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.000
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.000
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.000
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.000
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.000
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.000
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.000
PK27986.1 Cannabis sativa PK27986.1 I 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.000
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.000
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.000
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.000
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.000
Solyc07g055100.2 Solanum lycopersicum Solyc07g055100.2 N 0.000
TCM_029209 Theobroma cacao TCM_029209 I 0.000
TCM_042467 Theobroma cacao TCM_042467 N 0.000
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.000
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.000
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.000
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.000
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.000