Zfp12 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000006958 T108919_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF12
M04515_2.00 		Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN		 SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX 		0.800 0.957
ZNF12
M07611_2.00 		Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping 		0.800 0.957
ZNF12
M04516_2.00 		Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN		 SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX 		0.800 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000038579 C2H2 ZF 174 196
ENSRNOP00000038579 C2H2 ZF 202 224
ENSRNOP00000038579 C2H2 ZF 230 252
ENSRNOP00000038579 C2H2 ZF 258 280
ENSRNOP00000038579 C2H2 ZF 286 308
ENSRNOP00000038579 C2H2 ZF 314 336
ENSRNOP00000038579 C2H2 ZF 342 364
ENSRNOP00000038579 C2H2 ZF 370 392
ENSRNOP00000038579 C2H2 ZF 398 420
ENSRNOP00000038579 C2H2 ZF 426 448
ENSRNOP00000038579 C2H2 ZF 454 476
ENSRNOP00000038579 C2H2 ZF 482 504
ENSRNOP00000038579 C2H2 ZF 510 532
ENSRNOP00000038579 C2H2 ZF 538 560
ENSRNOP00000038579 C2H2 ZF 566 588

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp12 Mus musculus ENSMUSG00000029587 I 0.814
ENSSTOG00000022132 Ictidomys tridecemlineatus ENSSTOG00000022132 I 0.803
Zfp12 Dipodomys ordii ENSDORG00000005742 I 0.801
ZNF12 Otolemur garnettii ENSOGAG00000028373 I 0.800
ENSPANG00000021731 Papio anubis ENSPANG00000021731 I 0.800
ZNF12 Macaca mulatta ENSMMUG00000012343 I 0.800
ENSPPYG00000017356 Pongo abelii ENSPPYG00000017356 I 0.800
ENSTSYG00000010296 Tarsius syrichta ENSTSYG00000010296 I 0.800
ZNF12 Pan troglodytes ENSPTRG00000018919 I 0.800
ZNF12 Microcebus murinus ENSMICG00000008171 I 0.800
ENSNLEG00000015586 Nomascus leucogenys ENSNLEG00000015586 I 0.800
ZNF12 Callithrix jacchus ENSCJAG00000015557 I 0.800
ZNF12 Homo sapiens ENSG00000164631 D 0.800
ENSCSAG00000017682 Chlorocebus sabaeus ENSCSAG00000017682 I 0.800
ZNF12 Oryctolagus cuniculus ENSOCUG00000008958 I 0.799
ENSMPUG00000016596 Mustela putorius furo ENSMPUG00000016596 I 0.798
ENSAMEG00000006680 Ailuropoda melanoleuca ENSAMEG00000006680 I 0.798
ZNF12 Canis familiaris ENSCAFG00000015948 I 0.798
ZNF12 Tursiops truncatus ENSTTRG00000005007 I 0.798
ENSP00000409597-D73 Bos grunniens ENSP00000409597-D73 I 0.798
ZNF12 Bos taurus ENSBTAG00000039782 I 0.798
ENSOARG00000002550 Ovis aries ENSOARG00000002550 I 0.798
ENSSSCG00000030445 Sus scrofa ENSSSCG00000030445 I 0.797
ZNF12 Felis catus ENSFCAG00000008342 I 0.797
ZNF12 Sorex araneus ENSSARG00000012430 I 0.797
ZNF12 Equus caballus ENSECAG00000016420 I 0.794
Myotis_brandtii_ZNF12_10024232 Myotis brandtii Myotis_brandtii_ZNF12_10024232 I 0.783
ZNF12 Choloepus hoffmanni ENSCHOG00000013201 I 0.783
ZNF12 Dasypus novemcinctus ENSDNOG00000037946 I 0.781
ZNF84 Pteropus vampyrus ENSPVAG00000001565 I 0.763