Znf354b (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000029678 T109166_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF354B (zinc finger protein 354B). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF354B
M07653_2.00 		Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData 		0.776 0.943
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000004902 C2H2 ZF 145 167
ENSRNOP00000004902 C2H2 ZF 173 195
ENSRNOP00000004902 C2H2 ZF 201 223
ENSRNOP00000004902 C2H2 ZF 229 251
ENSRNOP00000004902 C2H2 ZF 282 304
ENSRNOP00000004902 C2H2 ZF 310 332
ENSRNOP00000004902 C2H2 ZF 338 360
ENSRNOP00000004902 C2H2 ZF 366 388
ENSRNOP00000004902 C2H2 ZF 394 416
ENSRNOP00000004902 C2H2 ZF 422 444
ENSRNOP00000004902 C2H2 ZF 450 472
ENSRNOP00000004902 C2H2 ZF 478 500
ENSRNOP00000004902 C2H2 ZF 506 528

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp354b Mus musculus ENSMUSG00000020335 I 0.793
ZNF354B Otolemur garnettii ENSOGAG00000027501 I 0.778
ZNF354B Homo sapiens ENSG00000178338 D 0.776
ZNF354B Pan troglodytes ENSPTRG00000017609 I 0.776
ZNF354B Gorilla gorilla ENSGGOG00000000628 I 0.776
ZNF354B Callithrix jacchus ENSCJAG00000018848 I 0.775
ENSPPYG00000016113 Pongo abelii ENSPPYG00000016113 I 0.773
ZNF354B Tursiops truncatus ENSTTRG00000015932 I 0.773
ENSCSAG00000008583 Chlorocebus sabaeus ENSCSAG00000008583 I 0.772
ZNF354B Dasypus novemcinctus ENSDNOG00000031129 I 0.770
ZNF354B Cavia porcellus ENSCPOG00000002227 I 0.770
ENSNLEG00000001411 Nomascus leucogenys ENSNLEG00000001411 I 0.769
ENSP00000327143 Macaca fascicularis ENSP00000327143 I 0.769
ENSMPUG00000000728 Mustela putorius furo ENSMPUG00000000728 I 0.769
ZNF354B Macaca mulatta ENSMMUG00000008976 I 0.769
ENSAMEG00000009090 Ailuropoda melanoleuca ENSAMEG00000009090 I 0.769
ZNF354B Canis familiaris ENSCAFG00000029114 I 0.769
ENSPANG00000013252 Papio anubis ENSPANG00000013252 I 0.768
ZNF354B Felis catus ENSFCAG00000022066 I 0.768
ENSOCUG00000029238 Oryctolagus cuniculus ENSOCUG00000029238 I 0.768
ZNF354B Equus caballus ENSECAG00000012028 I 0.767
ENSOARG00000006935 Ovis aries ENSOARG00000006935 I 0.763
ENSP00000304268-D38 Bos grunniens ENSP00000304268-D38 I 0.763
ZNF354B Pteropus vampyrus ENSPVAG00000007675 I 0.763
ZNF354B Bos taurus ENSBTAG00000017123 I 0.763
ENSSTOG00000008858 Ictidomys tridecemlineatus ENSSTOG00000008858 I 0.759