Gtf3a (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000050016 T109296_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gtf3a
M10364_2.00		 Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFIIIA_02		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gtf3a
M10338_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TFIIIA_01 		0.791 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000065623 C2H2 ZF 38 62
ENSRNOP00000065623 C2H2 ZF 68 92
ENSRNOP00000065623 C2H2 ZF 98 123
ENSRNOP00000065623 C2H2 ZF 130 154
ENSRNOP00000065623 C2H2 ZF 160 183
ENSRNOP00000065623 C2H2 ZF 187 211
ENSRNOP00000065623 C2H2 ZF 215 237
ENSRNOP00000065623 C2H2 ZF 244 269
ENSRNOP00000065623 C2H2 ZF 275 299

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gtf3a Mus musculus ENSMUSG00000016503 D 0.791
Myotis_brandtii_GTF3A_10026415 Myotis brandtii Myotis_brandtii_GTF3A_10026415 I 0.765
GTF3A Myotis lucifugus ENSMLUG00000002158 I 0.765