YY2 (Tupaia belangeri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTBEG00000011527 T111214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TYY2_RAT
M10385_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY2
0.821 0.912
YY1
M02877_2.00
Homo sapiens
NVSRCCATNDH

DHNATGGYSBN
SELEX
Jolma et al.(2013)
YY1_1
0.819 0.934
YY1
M04406_2.00
Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK

MGCACDNWHNVYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1
0.819 0.934
YY1
M04407_2.00
Homo sapiens
NKMCGCCATYTTGN

NCAARATGGCGKMN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2
0.819 0.934
YY1
M05845_2.00
Homo sapiens
NNNVGCCATNWYD

HRWNATGGCBNNN
SMiLE-seq
Isakova et al.(2017)
YY1
0.819 0.934
YY1
M08288_2.00
Homo sapiens
GCCGCCATBKYB

VRMVATGGCGGC
ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE
0.819 0.934
YY1
M08085_2.00
Homo sapiens
KCVGCCATBTTK

MAAVATGGCBGM
ChIP-seq
Mathelier et al.(2014)
MA0095.2
0.819 0.934
YY1
M07855_2.00
Homo sapiens
VNVGCCGCCATBTTK

MAAVATGGCGGCBNB
ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha
0.819 0.934
YY1
M07856_2.00
Homo sapiens
GCSGCCATBTT

AAVATGGCSGC
ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha
0.819 0.934
YY1
M07857_2.00
Homo sapiens
BSNVGCSGCCATBTT

AAVATGGCSGCBNSV
ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha
0.819 0.934
YY1
M07858_2.00
Homo sapiens
NNVGCSGCCATBTTK

MAAVATGGCSGCBNN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha
0.819 0.934
YY1
M07859_2.00
Homo sapiens
SBSGCSGCCATBTTK

MAAVATGGCSGCSVS
ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD
0.819 0.934
YY1
M07860_2.00
Homo sapiens
GCCGCCATBTTKNNN

NNNMAAVATGGCGGC
ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha
0.819 0.934
YY1
M07861_2.00
Homo sapiens
VGCSGCCATBTTK

MAAVATGGCSGCB
ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD
0.819 0.934
YY1
M08865_2.00
Homo sapiens
GCCGCCATYTTK

MAARATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A
0.819 0.934
Yy1
M08971_2.00
Mus musculus
GCCGCCATBTTB

VAAVATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A
0.819 0.934
YY1
M10138_2.00
Homo sapiens
NVNNDCCATNTWNNVWN

NWBNNWANATGGHNNBN
Transfac
Matys et al.(2006)
V$YY1_01
0.819 0.934
YY1
M10139_2.00
Homo sapiens
NNNSBGCCATCTDSNHTSND

HNSADNSHAGATGGCVSNNN
Transfac
Matys et al.(2006)
V$YY1_02
0.819 0.934
YY1
M10140_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_03
0.819 0.934
YY1
M10141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_07
0.819 0.934
YY1
M10142_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_08
0.819 0.934
YY1
M10143_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q4_01
0.819 0.934
YY1
M10144_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_02
0.819 0.934
YY1
M10145_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_03
0.819 0.934
YY1
M10146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6
0.819 0.934
YY1
M04408_2.00
Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY

RGCACDWWHHGYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1
0.819 0.934
YY1
M04409_2.00
Homo sapiens
RKCSGCCATYTTGD

HCAARATGGCSGMY
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2
0.819 0.934
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD

HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.819 0.934
pho
M06053_2.00
Drosophila melanogaster
KNVGCCATDAHNSY

RSNDTHATGGCBNM
B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521
0.804 0.923
pho
M06054_2.00
Drosophila melanogaster
KCCGCCATHWTK

MAWDATGGCGGM
B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521
0.804 0.923
pho
M06055_2.00
Drosophila melanogaster
NKBCGCCATHWTKNN

NNMAWDATGGCGVMN
B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521
0.804 0.923
phol
M06144_2.00
Drosophila melanogaster
CGCCATHTTK

MAADATGGCG
B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997
0.760 0.802
phol
M06145_2.00
Drosophila melanogaster
NKNCGCCATNTTKNN

NNMAANATGGCGNMN
B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997
0.760 0.802
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000009949 C2H2 ZF 262 285
ENSTBEP00000009949 C2H2 ZF 290 312
ENSTBEP00000009949 C2H2 ZF 318 342
ENSTBEP00000009949 C2H2 ZF 348 372

Links

Other C2H2 ZF family TFs
Other Tupaia belangeri TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANAC038 Arabidopsis thaliana AT2G24430 D 0.000
anac058 Arabidopsis thaliana AT3G18400 D 0.000
Cla019391 Citrullus lanatus Cla019391 I 0.000
Carubv10025508m.g Capsella rubella Carubv10025508m.g I 0.000
Carubv10015990m.g Capsella rubella Carubv10015990m.g I 0.000
Cagra.4091s0015 Capsella grandiflora Cagra.4091s0015 I 0.000
Cagra.1681s0009 Capsella grandiflora Cagra.1681s0009 I 0.000
Bostr.27895s0039 Boechera stricta Bostr.27895s0039 I 0.000
Bostr.26675s0262 Boechera stricta Bostr.26675s0262 I 0.000
Ciclev10008885m.g Citrus clementina Ciclev10008885m.g I 0.000
Ciclev10020480m.g Citrus clementina Ciclev10020480m.g I 0.000
Ciclev10023578m.g Citrus clementina Ciclev10023578m.g I 0.000
Eucgr.B00724 Eucalyptus grandis Eucgr.B00724 I 0.000
Eucgr.C02105 Eucalyptus grandis Eucgr.C02105 I 0.000
Eucgr.K02225 Eucalyptus grandis Eucgr.K02225 I 0.000
evm.TU.supercontig_244.7 Carica papaya evm.TU.supercontig_244.7 I 0.000
evm.TU.supercontig_3.509 Carica papaya evm.TU.supercontig_3.509 I 0.000
Bostr.19424s0822 Boechera stricta Bostr.19424s0822 I 0.000
Aquca_026_00305 Aquilegia coerulea Aquca_026_00305 I 0.000
Aquca_018_00116 Aquilegia coerulea Aquca_018_00116 I 0.000
Cla022572 Citrullus lanatus Cla022572 I 0.000
Pm005091 Prunus mume Pm005091 I 0.000
28226.m000851 Ricinus communis 28226.m000851 I 0.000
29974.m000235 Ricinus communis 29974.m000235 I 0.000
30138.m004055 Ricinus communis 30138.m004055 I 0.000
cassava17517.valid.m1 Manihot esculenta cassava17517.valid.m1 I 0.000
cassava18338.valid.m1 Manihot esculenta cassava18338.valid.m1 I 0.000
cassava2919.m1 Manihot esculenta cassava2919.m1 I 0.000
cassava9086.m1 Manihot esculenta cassava9086.m1 I 0.000
Cucsa.161510 Cucumis sativus Cucsa.161510 I 0.000
Cucsa.197830 Cucumis sativus Cucsa.197830 I 0.000
mgf021065m Mimulus guttatus mgf021065m I 0.000
mgf021404m Mimulus guttatus mgf021404m I 0.000
mgf025158m Mimulus guttatus mgf025158m I 0.000
gene08765-v1.0-hybrid Fragaria vesca gene08765-v1.0-hybrid I 0.000
gene26043-v1.0-hybrid Fragaria vesca gene26043-v1.0-hybrid I 0.000
Pavir.Ib03976 Panicum virgatum Pavir.Ib03976 I 0.000
SapurV1A.0263s0310 Salix purpurea SapurV1A.0263s0310 I 0.000
SapurV1A.0346s0160 Salix purpurea SapurV1A.0346s0160 I 0.000
SapurV1A.0377s0130 Salix purpurea SapurV1A.0377s0130 I 0.000
SapurV1A.0719s0060 Salix purpurea SapurV1A.0719s0060 I 0.000
SapurV1A.1146s0010 Salix purpurea SapurV1A.1146s0010 I 0.000
SapurV1A.1285s0100 Salix purpurea SapurV1A.1285s0100 I 0.000
SapurV1A.1363s0020 Salix purpurea SapurV1A.1363s0020 I 0.000
SapurV1A.1381s0050 Salix purpurea SapurV1A.1381s0050 I 0.000
SapurV1A.1381s0060 Salix purpurea SapurV1A.1381s0060 I 0.000
Thhalv10000520m.g Eutrema salsugineum Thhalv10000520m.g I 0.000
Thhalv10011708m.g Eutrema salsugineum Thhalv10011708m.g I 0.000
Thhalv10021200m.g Eutrema salsugineum Thhalv10021200m.g I 0.000
PK02366.1 Cannabis sativa PK02366.1 I 0.000
Pavir.Ia01262 Panicum virgatum Pavir.Ia01262 I 0.000
orange1.1g037591m.g Citrus sinensis orange1.1g037591m.g I 0.000
orange1.1g017827m.g Citrus sinensis orange1.1g017827m.g I 0.000
Gorai.006G060900 Gossypium raimondii Gorai.006G060900 I 0.000
Gorai.010G124100 Gossypium raimondii Gorai.010G124100 I 0.000
Lus10001648.g Linum usitatissimum Lus10001648.g I 0.000
Lus10009029.g Linum usitatissimum Lus10009029.g I 0.000
Lus10009669.g Linum usitatissimum Lus10009669.g I 0.000
Lus10020165.g Linum usitatissimum Lus10020165.g I 0.000
Lus10021659.g Linum usitatissimum Lus10021659.g I 0.000
Lus10026966.g Linum usitatissimum Lus10026966.g I 0.000
Lus10038937.g Linum usitatissimum Lus10038937.g I 0.000
MDP0000153949 Malus domestica MDP0000153949 I 0.000
MDP0000232008 Malus domestica MDP0000232008 I 0.000
MDP0000246482 Malus domestica MDP0000246482 I 0.000
MDP0000690168 Malus domestica MDP0000690168 I 0.000
MDP0000911724 Malus domestica MDP0000911724 I 0.000
chr1.LjT35C22.60.nc Lotus japonicus chr1.LjT35C22.60.nc I 0.000
anac058 Arabidopsis lyrata Al_scaffold_0003_1942 I 0.000
GLYMA06G08440 Glycine max GLYMA06G08440 I 0.000
GLYMA14G20276 Glycine max GLYMA14G20276 I 0.000
GSMUA_Achr10G19900_001 Musa acuminata GSMUA_Achr10G19900_001 I 0.000
GSMUA_Achr7G19680_001 Musa acuminata GSMUA_Achr7G19680_001 I 0.000
GSMUA_Achr8G18420_001 Musa acuminata GSMUA_Achr8G18420_001 I 0.000
LPERR03G21900 Leersia perrieri LPERR03G21900 I 0.000
MLOC_68284 Hordeum vulgare MLOC_68284 I 0.000
MTR_3g109340 Medicago truncatula MTR_3g109340 I 0.000
MTR_4g108760 Medicago truncatula MTR_4g108760 I 0.000
OB03G34470 Oryza brachyantha OB03G34470 I 0.000
OBART03G26480 Oryza barthii OBART03G26480 I 0.000
OGLUM03G27330 Oryza glumaepatula OGLUM03G27330 I 0.000
OMERI03G23890 Oryza meridionalis OMERI03G23890 I 0.000
ONIVA03G27500 Oryza nivara ONIVA03G27500 I 0.000
GLYMA04G08320 Glycine max GLYMA04G08320 I 0.000
ANAC039 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4000352 I 0.000
F775_05949 Aegilops tauschii F775_05949 I 0.000
AMTR_s00025p00174590 Amborella trichopoda AMTR_s00025p00174590 I 0.000
AMTR_s00079p00099620 Amborella trichopoda AMTR_s00079p00099620 I 0.000
BGIOSGA013151 Oryza indica BGIOSGA013151 I 0.000
Bo01320s020 Brassica oleracea Bo01320s020 I 0.000
Bo1g117610 Brassica oleracea Bo1g117610 I 0.000
Bo3g071500 Brassica oleracea Bo3g071500 I 0.000
Bo8g099810 Brassica oleracea Bo8g099810 I 0.000
Bra001705 Brassica rapa Bra001705 I 0.000
Bra003023 Brassica rapa Bra003023 I 0.000
Bra007855 Brassica rapa Bra007855 I 0.000
Bra022319 Brassica rapa Bra022319 I 0.000
Bra032095 Brassica rapa Bra032095 I 0.000
Bra037585 Brassica rapa Bra037585 I 0.000
BRADI1G14467 Brachypodium distachyon BRADI1G14467 I 0.000
OPUNC03G24220 Oryza punctata OPUNC03G24220 I 0.000
ORGLA03G0246300 Oryza glaberrima ORGLA03G0246300 I 0.000
Si036535m.g Setaria italica Si036535m.g I 0.000
Solyc03g115850.2 Solanum lycopersicum Solyc03g115850.2 I 0.000
Solyc06g069100.1 Solanum lycopersicum Solyc06g069100.1 I 0.000
Solyc06g069710.2 Solanum lycopersicum Solyc06g069710.2 I 0.000
Solyc08g006020.2 Solanum lycopersicum Solyc08g006020.2 I 0.000
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.000
Solyc12g036480.1 Solanum lycopersicum Solyc12g036480.1 I 0.000
TCM_012350 Theobroma cacao TCM_012350 I 0.000
TCM_036791 Theobroma cacao TCM_036791 I 0.000
Traes_4AL_B44DF4ACC Triticum aestivum Traes_4AL_B44DF4ACC I 0.000
Traes_4BS_373BDBA94 Triticum aestivum Traes_4BS_373BDBA94 I 0.000
TRIUR3_27612 Triticum urartu TRIUR3_27612 I 0.000
ANAC039 Vitis vinifera VIT_04s0008g02710 I 0.000
anac058 Vitis vinifera VIT_17s0000g03660 I 0.000
Sb01g014310 Sorghum bicolor Sb01g014310 I 0.000
PRUPE_ppa025916mg Prunus persica PRUPE_ppa025916mg I 0.000
PRUPE_ppa007653mg Prunus persica PRUPE_ppa007653mg I 0.000
ORUFI03G27440 Oryza rufipogon ORUFI03G27440 I 0.000
OS03G0624600 Oryza sativa OS03G0624600 I 0.000
PGSC0003DMG400005384 Solanum tuberosum PGSC0003DMG400005384 I 0.000
PGSC0003DMG400014845 Solanum tuberosum PGSC0003DMG400014845 I 0.000
PGSC0003DMG400019523 Solanum tuberosum PGSC0003DMG400019523 I 0.000
PGSC0003DMG400028779 Solanum tuberosum PGSC0003DMG400028779 I 0.000
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.000
PGSC0003DMG400033047 Solanum tuberosum PGSC0003DMG400033047 I 0.000
POPTR_0006s29180 Populus trichocarpa POPTR_0006s29180 I 0.000
POPTR_0012s01610 Populus trichocarpa POPTR_0012s01610 I 0.000
POPTR_0012s05280 Populus trichocarpa POPTR_0012s05280 I 0.000
POPTR_0015s02170 Populus trichocarpa POPTR_0015s02170 I 0.000
POPTR_0015s03700 Populus trichocarpa POPTR_0015s03700 I 0.000
POPTR_0018s03910 Populus trichocarpa POPTR_0018s03910 I 0.000
Ca_11021 Cicer arietinum Ca_11021 I 0.000