hic1 (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000004590 T112254_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.817 0.957
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.817 0.957
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.817 0.957
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.817 0.957
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.800 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000010922 C2H2 ZF 427 449
ENSTRUP00000010922 C2H2 ZF 492 514
ENSTRUP00000010922 C2H2 ZF 520 542
ENSTRUP00000010922 C2H2 ZF 548 570
ENSTRUP00000010922 C2H2 ZF 576 598
ENSTRUP00000010923 C2H2 ZF 410 432
ENSTRUP00000010923 C2H2 ZF 475 497
ENSTRUP00000010923 C2H2 ZF 503 525
ENSTRUP00000010923 C2H2 ZF 531 553
ENSTRUP00000010923 C2H2 ZF 559 581

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

Invalid Input OrderBy

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action