Hic1 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000043099 T101179_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hic1
M00141_2.00		 Mus musculus
RTGCCMNBN
NVNKGGCAY		 PBM
Badis et al.(2009)
Hic1_2816		 (Direct) (Direct)
Hic1
M02933_2.00		 Mus musculus
RTGCCAVCYBRTGCCAVC
GBTGGCAYVRGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_1		 (Direct) (Direct)
Hic1
M02934_2.00		 Mus musculus
RTGCCAVCN
NGBTGGCAY		 SELEX
Jolma et al.(2013)
Hic1_2		 (Direct) (Direct)
Hic1
M09003_2.00		 Mus musculus
KGGCAMCCH
DGGKTGCCM		 Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIC2
M02902_2.00 		Homo sapiens
RTGCCMVNN
NNBKGGCAY		 SELEX
Jolma et al.(2013)
HIC2_1 		0.795 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00141_2.00 C2H2 ZF 16 38
M00141_2.00 C2H2 ZF 86 108
M00141_2.00 C2H2 ZF 114 136
M00141_2.00 C2H2 ZF 142 164
M00141_2.00 C2H2 ZF 170 192

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000053483 C2H2 ZF 597 619
ENSMUSP00000053483 C2H2 ZF 667 689
ENSMUSP00000053483 C2H2 ZF 695 717
ENSMUSP00000053483 C2H2 ZF 723 745
ENSMUSP00000053483 C2H2 ZF 751 773

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.827
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.827
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.825
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.825
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.825
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.825
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.825
Aan_R003503 Calypte anna Aan_R003503 I 0.825
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.825
ENSLACG00000007028 Latimeria chalumnae ENSLACG00000007028 I 0.823
XP_002937184 Xenopus tropicalis XP_002937184 I 0.823
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.817
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.817
hic1 Oryzias latipes ENSORLG00000004895 I 0.814
HIC2 Canis familiaris ENSCAFG00000032493 I 0.795
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.795
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.795
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.795
HIC2 Equus caballus ENSECAG00000017997 I 0.795
HIC2 Felis catus ENSFCAG00000023903 I 0.795
HIC2 Homo sapiens ENSG00000169635 D 0.795
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.795
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.795
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.795
Hic2 Mus musculus ENSMUSG00000050240 I 0.795
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.795
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.795
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.795
HIC2 Procavia capensis ENSPCAG00000015907 I 0.795
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.795
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.795
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.795
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.795
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.795
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.795
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.795
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.795
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.793
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.793
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.793
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.793
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.793
HIC2 Microcebus murinus ENSMICG00000005154 I 0.793
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.793
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.793
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.793
Aan_R008211 Calypte anna Aan_R008211 I 0.793
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.793
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.793
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.793
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.793
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.793
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.793
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.793
Tal_R003180 Tyto alba Tal_R003180 I 0.793
hic2 Xenopus tropicalis XB-GENE-960044 I 0.791
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.789
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.789
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.789
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.789
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.789
HIC2 Bos taurus ENSBTAG00000005951 I 0.781
HIC1 Anolis carolinensis ENSACAG00000011777 I 0.767