CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF140
(
Vicugna pacos
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSVPAG00000011394
T113663_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF140
M04621_2.00
Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH
SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX
0.799
0.926
ZNF140
M08372_2.00
Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG
ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE
0.799
0.926
ZNF140
M08945_2.00
Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN
Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C
0.799
0.926
ZNF140
M04622_2.00
Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN
SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX
0.799
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000010612
C2H2 ZF
159
181
YGCQECGKTFSRRFSLVLHQRTH
ENSVPAP00000010612
C2H2 ZF
187
209
YVCKECGKTFSQISNLVKHQMIH
ENSVPAP00000010612
C2H2 ZF
215
237
HECKDCSKTFSYLSFLIEHQRTH
ENSVPAP00000010612
C2H2 ZF
243
265
YECTECGKAFSRASNLTRHQRIH
ENSVPAP00000010612
C2H2 ZF
271
293
YVCRKCGKAFSSGSELIRHQITH
ENSVPAP00000010612
C2H2 ZF
299
321
YECIECGKAFRRSSHLTRHQSVH
ENSVPAP00000010612
C2H2 ZF
327
349
YECGECSKAFRCHSFLIKHQRIH
ENSVPAP00000010612
C2H2 ZF
355
377
FECDECGKVFTWHASLAQHMKIH
ENSVPAP00000010612
C2H2 ZF
383
405
YACAECDKTFSRSFSLILHQITH
ENSVPAP00000010612
C2H2 ZF
411
433
YVCQVCSKSFSWSSNLAKHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Vicugna pacos
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000008528
Ovis aries
ENSOARG00000008528
I
0.823
ZNF140
Bos taurus
ENSBTAG00000040072
I
0.823
ENSAMEG00000013369
Ailuropoda melanoleuca
ENSAMEG00000013369
I
0.811
Myotis_brandtii_ZNF140_10005227
Myotis brandtii
Myotis_brandtii_ZNF140_10005227
I
0.810
ZNF140
Myotis lucifugus
ENSMLUG00000009202
I
0.809
ZNF140
Tursiops truncatus
ENSTTRG00000004364
I
0.808
ZNF140
Pteropus vampyrus
ENSPVAG00000014537
I
0.807
ENSMPUG00000002714
Mustela putorius furo
ENSMPUG00000002714
I
0.807
ZNF140
Echinops telfairi
ENSETEG00000020180
I
0.807
ZNF140
Canis familiaris
ENSCAFG00000030275
I
0.806
ZNF140
Equus caballus
ENSECAG00000007427
I
0.805
ZNF140
Felis catus
ENSFCAG00000024075
I
0.805
ZNF140
Otolemur garnettii
ENSOGAG00000030665
I
0.805
ZNF140
Pan troglodytes
ENSPTRG00000023960
I
0.801
ENSNLEG00000012479
Nomascus leucogenys
ENSNLEG00000012479
I
0.801
ZNF140
Gorilla gorilla
ENSGGOG00000026442
I
0.801
ZNF140
Homo sapiens
ENSG00000196387
D
0.799
ENSPPYG00000005153
Pongo abelii
ENSPPYG00000005153
I
0.799
ZNF140
Procavia capensis
ENSPCAG00000014332
I
0.798
ENSP00000347755
Macaca fascicularis
ENSP00000347755
I
0.797
ENSSTOG00000014531
Ictidomys tridecemlineatus
ENSSTOG00000014531
I
0.797
ENSPANG00000001812
Papio anubis
ENSPANG00000001812
I
0.797
ZNF140
Macaca mulatta
ENSMMUG00000003150
I
0.797
ENSCSAG00000001815
Chlorocebus sabaeus
ENSCSAG00000001815
I
0.797
ZNF140
Dasypus novemcinctus
ENSDNOG00000019632
I
0.797
ZNF140
Callithrix jacchus
ENSCJAG00000013104
I
0.796
ZNF140
Sorex araneus
ENSSARG00000000083
I
0.788