CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSXMAG00000009866
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000009866
T113857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL1
M04556_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX
0.803
0.884
OVOL1
M08919_2.00
Homo sapiens
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C
0.803
0.884
OVOL1
M04557_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX
0.803
0.884
Ovol1
M08974_2.00
Mus musculus
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C
0.799
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000009887
C2H2 ZF
119
141
FVCQVCQKTFQFQRMLNRHVKCH
ENSXMAP00000009887
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSXMAP00000009887
C2H2 ZF
176
199
YKCSLCDKAFTQRCSLESHMKKIH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OVOL1
Homo sapiens
ENSG00000172818
D
0.803
ENSPANG00000002371
Papio anubis
ENSPANG00000002371
I
0.799
ENSPPYG00000003049
Pongo abelii
ENSPPYG00000003049
I
0.799
OVOL1
Otolemur garnettii
ENSOGAG00000016496
I
0.799
OVOL1
Ornithorhynchus anatinus
ENSOANG00000015786
I
0.799
ENSAMEG00000017343
Ailuropoda melanoleuca
ENSAMEG00000017343
I
0.799
ENSNLEG00000005840
Nomascus leucogenys
ENSNLEG00000005840
I
0.799
ENSOARG00000017840
Ovis aries
ENSOARG00000017840
I
0.799
OVOL1
Pan troglodytes
ENSPTRG00000003893
I
0.799
ENSP00000337862
Macaca fascicularis
ENSP00000337862
I
0.799
Myotis_brandtii_OVOL1_10030735
Myotis brandtii
Myotis_brandtii_OVOL1_10030735
I
0.799
OVOL1
Tursiops truncatus
ENSTTRG00000016929
I
0.799
ENSSTOG00000003150
Ictidomys tridecemlineatus
ENSSTOG00000003150
I
0.799
Ovol1
Rattus norvegicus
ENSRNOG00000020669
I
0.799
OVOL1
Sus scrofa
ENSSSCG00000027361
I
0.799
ENSMPUG00000011594
Mustela putorius furo
ENSMPUG00000011594
I
0.799
Ovol1
Mus musculus
ENSMUSG00000024922
D
0.799
ENSCSAG00000007998
Chlorocebus sabaeus
ENSCSAG00000007998
I
0.799
OVOL1
Equus caballus
ENSECAG00000017302
I
0.799
ENSCPOG00000000009
Cavia porcellus
ENSCPOG00000000009
I
0.799
OVOL1
Callithrix jacchus
ENSCJAG00000001957
I
0.799
OVOL1
Bos taurus
ENSBTAG00000012656
I
0.799
OVOL1
Canis familiaris
ENSCAFG00000013285
I
0.799
OVOL1
Monodelphis domestica
ENSMODG00000009534
I
0.799
OVOL1
Felis catus
ENSFCAG00000007902
I
0.799
OVOL1
Myotis lucifugus
ENSMLUG00000008789
I
0.799
OVOL1
Macaca mulatta
ENSMMUG00000012585
I
0.799
ENSMEUG00000008765
Macropus eugenii
ENSMEUG00000008765
I
0.799
ENSMICG00000013034
Microcebus murinus
ENSMICG00000013034
I
0.799
OVOL1
Gorilla gorilla
ENSGGOG00000008101
I
0.799
OVOL1
Loxodonta africana
ENSLAFG00000015644
I
0.799
ENSPSIG00000002913
Pelodiscus sinensis
ENSPSIG00000002913
I
0.796
Alligator_sinensis_CCG003566.1
Alligator sinensis
Alligator_sinensis_CCG003566.1
I
0.770
e_gw.374.48.1
Branchiostoma floridae
e_gw.374.48.1
I
0.769
e_gw.236.92.1
Branchiostoma floridae
e_gw.236.92.1
I
0.769