CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F443_18706
(
Phytophthora parasitica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
F443_18706
T114281_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETI34877
C2H2 ZF
120
144
FVCPEVHCGKQFPRSFALRRHMRIH
ETI34877
C2H2 ZF
150
174
YACDYQGCAQRFNTSGNLSRHKRIH
ETI34877
C2H2 ZF
180
204
YPCFFETCGKRFNTSTKLKRHMRIH
ETI34877
C2H2 ZF
212
236
FRCTEQGCSWACDNYKEYVQHQKLH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora parasitica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITG_14515
Phytophthora infestans
PITG_14515
N
0.824
PITG_20637
Phytophthora infestans
PITG_20637
N
0.824
Physo134019
Phytophthora sojae
Physo134019
N
0.822
fgenesh_scip_prom.28083.4436
Phytophthora lateralis
fgenesh_scip_prom.28083.4436
N
0.822
Phyra80976
Phytophthora ramorum
Phyra80976
N
0.822
maker-pve_contig_254-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_254-fgenesh-gene-0.2
N
0.806
fgenesh_scip_prom.46568.1302
Phytophthora kernoviae
fgenesh_scip_prom.46568.1302
N
0.799
fgenesh_scip_prom.28083.10560
Phytophthora lateralis
fgenesh_scip_prom.28083.10560
N
0.795
maker-pir_contig_580-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_580-fgenesh-gene-0.3
N
0.792
PYU1_G013877
Pythium ultimum
PYU1_G013877
N
0.780
maker-pag1_scaffold_323-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_323-fgenesh-gene-0.7
N
0.757