CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pve_contig_254-fgenesh-gene-0.2
(
Pythium vexans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-pve_contig_254-fgenesh-gene-0.2
T122610_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000017924
C2H2 ZF
61
85
FVCPEPQCGKTFPRSFALRRHQRIH
EPrPV00000017924
C2H2 ZF
91
115
YACDFAGCAQRFNTSGNLSRHKRIH
EPrPV00000017924
C2H2 ZF
121
145
YPCIFATCGKRFNTSTKLKRHMRIH
EPrPV00000017924
C2H2 ZF
153
178
FRCVGVECSWSCDNYKEFAQHQKLHH
Links
Other
C2H2 ZF
family TFs
Other
Pythium vexans
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.46568.1302
Phytophthora kernoviae
fgenesh_scip_prom.46568.1302
N
0.808
F443_18706
Phytophthora parasitica
F443_18706
N
0.806
Phyra80976
Phytophthora ramorum
Phyra80976
N
0.806
Physo134019
Phytophthora sojae
Physo134019
N
0.806
fgenesh_scip_prom.28083.4436
Phytophthora lateralis
fgenesh_scip_prom.28083.4436
N
0.806
fgenesh_scip_prom.28083.10560
Phytophthora lateralis
fgenesh_scip_prom.28083.10560
N
0.804
PITG_20637
Phytophthora infestans
PITG_20637
N
0.803
PITG_14515
Phytophthora infestans
PITG_14515
N
0.803
maker-pir_contig_580-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_580-fgenesh-gene-0.3
N
0.782
maker-pag1_scaffold_323-fgenesh-gene-0.7
Pythium aphanidermatum
maker-pag1_scaffold_323-fgenesh-gene-0.7
N
0.772
PYU1_G013877
Pythium ultimum
PYU1_G013877
N
0.770