GSMUA_Achr6G24730_001 (Musa acuminata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GSMUA_Achr6G24730_001 T118724_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.759 0.674
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.758 0.652
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.758 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P24730_001 C2H2 ZF 102 124
GSMUA_Achr6P24730_001 C2H2 ZF 162 184

Links

Other C2H2 ZF family TFs
Other Musa acuminata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT5G03510 Arabidopsis thaliana AT5G03510 D 0.759
AT5G04390 Arabidopsis thaliana AT5G04390 D 0.758
Aquca_010_00704 Aquilegia coerulea Aquca_010_00704 I 0.758
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.758
mgf023249m Mimulus guttatus mgf023249m I 0.758
mgf021789m Mimulus guttatus mgf021789m I 0.757
Cucsa.379890 Cucumis sativus Cucsa.379890 I 0.758
Cucsa.213470 Cucumis sativus Cucsa.213470 I 0.758
Cucsa.165460 Cucumis sativus Cucsa.165460 I 0.758
Cucsa.065930 Cucumis sativus Cucsa.065930 I 0.758
cassava9455.m1 Manihot esculenta cassava9455.m1 I 0.758
cassava42054.valid.m1 Manihot esculenta cassava42054.valid.m1 I 0.758
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I 0.758
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.760
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I 0.760
Eucgr.B02390 Eucalyptus grandis Eucgr.B02390 I 0.758
Eucgr.A01233 Eucalyptus grandis Eucgr.A01233 I 0.758
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.758
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I 0.758
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.764
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.764
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.764
Ciclev10029464m.g Citrus clementina Ciclev10029464m.g I 0.759
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I 0.758
Carubv10024141m.g Capsella rubella Carubv10024141m.g I 0.760
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.764
cassava35212.m1 Manihot esculenta cassava35212.m1 I 0.759
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I 0.758
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I 0.758
TRIUR3_01065 Triticum urartu TRIUR3_01065 I 0.769
TRIUR3_01063 Triticum urartu TRIUR3_01063 I 0.769
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I 0.772
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I 0.768
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I 0.766
Traes_5BL_9C687EE11 Triticum aestivum Traes_5BL_9C687EE11 I 0.766
Traes_5BL_3A9D3CEEF Triticum aestivum Traes_5BL_3A9D3CEEF I 0.766
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.775
Cla004091 Citrullus lanatus Cla004091 I 0.758
Cla008415 Citrullus lanatus Cla008415 I 0.758
cassava16287.m1 Manihot esculenta cassava16287.m1 I 0.758
cassava15802.m1 Manihot esculenta cassava15802.m1 I 0.758
29585.m000611 Ricinus communis 29585.m000611 I 0.758
29154.m000218 Ricinus communis 29154.m000218 I 0.758
28637.m000203 Ricinus communis 28637.m000203 I 0.759
Pm018761 Prunus mume Pm018761 I 0.758
Pm002762 Prunus mume Pm002762 I 0.758
Pm000815 Prunus mume Pm000815 I 0.758
Cla018516 Citrullus lanatus Cla018516 I 0.758
Cla013490 Citrullus lanatus Cla013490 I 0.758
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.762
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I 0.758
orange1.1g031430m.g Citrus sinensis orange1.1g031430m.g I 0.759
MDP0000606526 Malus domestica MDP0000606526 I 0.758
MDP0000595671 Malus domestica MDP0000595671 I 0.758
MDP0000257423 Malus domestica MDP0000257423 I 0.758
MDP0000224773 Malus domestica MDP0000224773 I 0.758
MDP0000170739 Malus domestica MDP0000170739 I 0.758
MDP0000137826 Malus domestica MDP0000137826 I 0.758
Lus10030330.g Linum usitatissimum Lus10030330.g I 0.758
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.758
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I 0.758
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I 0.758
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.764
PK27255.1 Cannabis sativa PK27255.1 I 0.758
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.760
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I 0.758
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I 0.758
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.775
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.769
Pavir.J00894 Panicum virgatum Pavir.J00894 I 0.768
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.775
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.764
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.764
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I 0.758
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I 0.758
gene13959-v1.0-hybrid Fragaria vesca gene13959-v1.0-hybrid I 0.758
evm.TU.supercontig_190.30 Carica papaya evm.TU.supercontig_190.30 I 0.758
evm.TU.supercontig_163.32 Carica papaya evm.TU.supercontig_163.32 I 0.758
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I 0.758
Eucgr.L02150 Eucalyptus grandis Eucgr.L02150 I 0.758
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I 0.758
Eucgr.B02399 Eucalyptus grandis Eucgr.B02399 I 0.758
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I 0.768
Eucgr.B02396 Eucalyptus grandis Eucgr.B02396 I 0.758
Eucgr.B02395 Eucalyptus grandis Eucgr.B02395 I 0.758
gene13960-v1.0-hybrid Fragaria vesca gene13960-v1.0-hybrid I 0.758
gene13962-v1.0-hybrid Fragaria vesca gene13962-v1.0-hybrid I 0.758
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I 0.758
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.758
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.760
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I 0.758
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I 0.758
Gorai.003G136200 Gossypium raimondii Gorai.003G136200 I 0.759
gene28452-v1.0-hybrid Fragaria vesca gene28452-v1.0-hybrid I 0.758
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I 0.758
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I 0.758
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I 0.758
Eucgr.B02394 Eucalyptus grandis Eucgr.B02394 I 0.760
MLOC_63032 Hordeum vulgare MLOC_63032 I 0.768
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.764
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.769
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.769
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I 0.758
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I 0.769
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I 0.758
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.762
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.775
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.768
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.775
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.759
GSMUA_Achr1G03310_001 Musa acuminata GSMUA_Achr1G03310_001 I 0.758
MLOC_19822 Hordeum vulgare MLOC_19822 I 0.766
LPERR03G33240 Leersia perrieri LPERR03G33240 I 0.768
LPERR03G33230 Leersia perrieri LPERR03G33230 I 0.766
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.775
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.762
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I 0.759
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I 0.758
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.758
GSMUA_Achr5G28550_001 Musa acuminata GSMUA_Achr5G28550_001 I 0.764
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I 0.769
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.774
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.774
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I 0.768
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I 0.774
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I 0.775
Bra017188 Brassica rapa Bra017188 I 0.760
Bra005197 Brassica rapa Bra005197 I 0.760
Bo4g186920 Brassica oleracea Bo4g186920 I 0.760
Bo4g030570 Brassica oleracea Bo4g030570 I 0.760
BGIOSGA013832 Oryza indica BGIOSGA013832 I 0.768
BGIOSGA013831 Oryza indica BGIOSGA013831 I 0.766
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.775
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.774
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.775
GLYMA20G23180 Glycine max GLYMA20G23180 I 0.758
GLYMA19G35740 Glycine max GLYMA19G35740 I 0.758
GLYMA18G52410 Glycine max GLYMA18G52410 I 0.758
GLYMA10G43630 Glycine max GLYMA10G43630 I 0.758
GLYMA03G33050 Glycine max GLYMA03G33050 I 0.758
GLYMA02G10490 Glycine max GLYMA02G10490 I 0.758
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.760
F775_52353 Aegilops tauschii F775_52353 I 0.756
F775_18609 Aegilops tauschii F775_18609 I 0.769
F775_18608 Aegilops tauschii F775_18608 I 0.768
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.762
TCM_041899 Theobroma cacao TCM_041899 I 0.759
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I 0.758
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I 0.758
POPTR_0006s12340 Populus trichocarpa POPTR_0006s12340 I 0.758
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.768
PGSC0003DMG400039582 Solanum tuberosum PGSC0003DMG400039582 I 0.760
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I 0.758
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I 0.758
PGSC0003DMG400008327 Solanum tuberosum PGSC0003DMG400008327 I 0.760
OS03G0820400 Oryza sativa OS03G0820400 I 0.768
OS03G0820300 Oryza sativa OS03G0820300 I 0.766
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I 0.758
PRUPE_ppa012242mg Prunus persica PRUPE_ppa012242mg I 0.764
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.768
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I 0.758
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I 0.758
Si037672m.g Setaria italica Si037672m.g I 0.768
Si008395m.g Setaria italica Si008395m.g I 0.769
Si003051m.g Setaria italica Si003051m.g I 0.774
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.769
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.775
Sb01g003280 Sorghum bicolor Sb01g003280 I 0.768
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I 0.758
OS01G0839100 Oryza sativa OS01G0839100 I 0.775
OS01G0838600 Oryza sativa OS01G0838600 I 0.762
OMERI03G35880 Oryza meridionalis OMERI03G35880 I 0.768
OMERI03G35870 Oryza meridionalis OMERI03G35870 I 0.766
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.775
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.762
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I 0.768
OGLUM03G38900 Oryza glumaepatula OGLUM03G38900 I 0.766
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.775
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.762
OBART03G39050 Oryza barthii OBART03G39050 I 0.768
OB03G46010 Oryza brachyantha OB03G46010 I 0.768
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.762
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.775
ORUFI03G40740 Oryza rufipogon ORUFI03G40740 I 0.766
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.762
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I 0.768
ORGLA03G0358100 Oryza glaberrima ORGLA03G0358100 I 0.766
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.775
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.762
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.775
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.775
ONIVA03G40720 Oryza nivara ONIVA03G40720 I 0.768
ONIVA03G40710 Oryza nivara ONIVA03G40710 I 0.766
MTR_7g023560 Medicago truncatula MTR_7g023560 I 0.758