CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HpaG807312
(
Hyaloperonospora arabidopsidis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HpaG807312
T119808_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra84400
M01183_2.00
Phytophthora ramorum
HRHCKYCGGM
KCCGRMGDYD
PBM
Lambert et al.(2019)
pTH11169
0.821
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HpaP807312
C2H2 ZF
48
72
FRCTFPGCGREFQLKGNLKRHVNIH
HpaP807312
C2H2 ZF
78
100
FACKFCDKKFLRKADMEVHYRVH
HpaP807312
C2H2 ZF
106
130
YRCKYQVCGKCFARRSDLLSHERTH
HpaP807312
C2H2 ZF
136
160
YACAFPGCDRSFARKFDLHKHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Hyaloperonospora arabidopsidis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy