CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0K01703
(
Kazachstania naganishii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KNAG_0K01703
T120762_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RPN4
M00017_2.00
Saccharomyces cerevisiae
NNCGCCACCN
NGGTGGCGNN
PBM
Badis et al.(2008)
RPN4_2137
0.786
0.902
RPN4
M01525_2.00
Saccharomyces cerevisiae
NWWWWWWWWN
NWWWWWWWWN
PBM
Zhu et al.(2009)
Rpn4
0.786
0.902
RPN4
M07447_2.00
Saccharomyces cerevisiae
CGCCACY
RGTGGCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0373.1
0.786
0.902
RPN4
M08511_2.00
Saccharomyces cerevisiae
NNNRGTGGCRAM
KTYGCCACYNNN
Misc
DeBoer et al.(2011)
YDL020C_1700
0.786
0.902
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK72534
C2H2 ZF
357
375
CGASFSRIYDLTRHQNTIH
CCK72534
C2H2 ZF
382
414
FRCTQCIALFGDEGYAKTFSRLDALTRHIKSKH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania naganishii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZYRO0A05302g
Zygosaccharomyces rouxii
ZYRO0A05302g
I
0.786
ZBAI_08006
Zygosaccharomyces bailii
ZBAI_08006
I
0.786
Scas_Contig718.67
Saccharomyces castellii
Scas_Contig718.67
I
0.786
3679_YDL020C
Saccharomyces paradoxus
3679_YDL020C
I
0.786
3988_YDL020C
Saccharomyces bayanus
3988_YDL020C
I
0.786
ZBAI_02149
Zygosaccharomyces bailii
ZBAI_02149
I
0.786
RPN4
Saccharomyces cerevisiae
YDL020C
D
0.786
NCAS_0I01820
Naumovozyma castellii
NCAS_0I01820
I
0.786
KAFR_0F02260
Kazachstania africana
KAFR_0F02260
I
0.786
NDAI_0A06440
Naumovozyma dairenensis
NDAI_0A06440
I
0.786
SKUD_186708
Saccharomyces kudriavzevii
SKUD_186708
I
0.786
TPHA_0H00790
Tetrapisispora phaffii
TPHA_0H00790
I
0.786
TDEL_0D04500
Torulaspora delbrueckii
TDEL_0D04500
I
0.786
3158_YDL020C
Saccharomyces mikatae
3158_YDL020C
I
0.780
KAFR_0C00960
Kazachstania africana
KAFR_0C00960
I
0.770