Si010615m.g (Setaria italica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Si010615m.g T128661_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.809 0.778
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.786 0.800
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH

DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.786 0.800
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN

NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.769 0.689
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010615m C2H2 ZF 178 199
Si010615m C2H2 ZF 241 263

Links

Other C2H2 ZF family TFs
Other Setaria italica TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02130 Aegilops tauschii F775_02130 N 0.000
BRADI3G38360 Brachypodium distachyon BRADI3G38360 N 0.000
BRADI4G32470 Brachypodium distachyon BRADI4G32470 N 0.000
Eucgr.F02138 Eucalyptus grandis Eucgr.F02138 N 0.000
MLOC_70640 Hordeum vulgare MLOC_70640 N 0.000
MLOC_2366 Hordeum vulgare MLOC_2366 N 0.000
LPERR08G15030 Leersia perrieri LPERR08G15030 N 0.000
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.000
MDP0000562627 Malus domestica MDP0000562627 N 0.000
mgf022146m Mimulus guttatus mgf022146m N 0.000
GSMUA_Achr9G15140_001 Musa acuminata GSMUA_Achr9G15140_001 N 0.000
GSMUA_Achr3G06780_001 Musa acuminata GSMUA_Achr3G06780_001 N 0.000
OBART09G13210 Oryza barthii OBART09G13210 N 0.000
OB08G25230 Oryza brachyantha OB08G25230 N 0.000
ORGLA08G0157100 Oryza glaberrima ORGLA08G0157100 N 0.000
OGLUM09G13640 Oryza glumaepatula OGLUM09G13640 N 0.000
OGLUM08G19000 Oryza glumaepatula OGLUM08G19000 N 0.000
BGIOSGA030928 Oryza indica BGIOSGA030928 N 0.000
BGIOSGA028855 Oryza indica BGIOSGA028855 N 0.000
OMERI09G10230 Oryza meridionalis OMERI09G10230 N 0.000
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.000
ONIVA09G13640 Oryza nivara ONIVA09G13640 N 0.000
ONIVA08G20180 Oryza nivara ONIVA08G20180 N 0.000
OPUNC08G16020 Oryza punctata OPUNC08G16020 N 0.000
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.000
ORUFI08G20260 Oryza rufipogon ORUFI08G20260 N 0.000
ORUFI09G14130 Oryza rufipogon ORUFI09G14130 N 0.000
OS08G0477900 Oryza sativa OS08G0477900 N 0.000
Pavir.J25149 Panicum virgatum Pavir.J25149 N 0.000
Pavir.Ba01985 Panicum virgatum Pavir.Ba01985 N 0.000
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N 0.000
Pavir.J16121 Panicum virgatum Pavir.J16121 N 0.000
29908.m006255 Ricinus communis 29908.m006255 N 0.000
Si033077m.g Setaria italica Si033077m.g N 0.000
Si014356m.g Setaria italica Si014356m.g N 0.000
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.000
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.000
Sb02g026920 Sorghum bicolor Sb02g026920 N 0.000
Sb07g023280 Sorghum bicolor Sb07g023280 N 0.000
Traes_5BL_553BE31FE Triticum aestivum Traes_5BL_553BE31FE N 0.000
Traes_2BL_649181D92 Triticum aestivum Traes_2BL_649181D92 N 0.000
Traes_2AL_7A37B5232 Triticum aestivum Traes_2AL_7A37B5232 N 0.000
Traes_2DL_5F0BD9D6F Triticum aestivum Traes_2DL_5F0BD9D6F N 0.000
TRIUR3_09991 Triticum urartu TRIUR3_09991 N 0.000
GRMZM2G113257 Zea mays GRMZM2G113257 N 0.000
GRMZM2G145146 Zea mays GRMZM2G145146 N 0.000