Si010615m.g (Setaria italica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Si010615m.g T128661_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.809 0.778
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.786 0.800
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.786 0.800
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.769 0.689
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010615m C2H2 ZF 178 199
Si010615m C2H2 ZF 241 263

Links

Other C2H2 ZF family TFs
Other Setaria italica TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.827
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.809
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.809
ZAT1 Arabidopsis thaliana AT1G02030 D 0.809
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.809
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.803
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.803
OBART04G21020 Oryza barthii OBART04G21020 I 0.803
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.803
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.803
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.803
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.803
OS04G0552700 Oryza sativa OS04G0552700 I 0.803
OB04G28040 Oryza brachyantha OB04G28040 I 0.797
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.797
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.796
29661.m000908 Ricinus communis 29661.m000908 I 0.794
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.793
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.793
OS02G0659500 Oryza sativa OS02G0659500 I 0.793
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.793
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.793
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.793
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.793
OBART02G26700 Oryza barthii OBART02G26700 I 0.793
30174.m008818 Ricinus communis 30174.m008818 I 0.792
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.792
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.792
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.792
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.792
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.792
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.792
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.791
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.786
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.786
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.786
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.786
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.786
Bra003422 Brassica rapa Bra003422 I 0.786
Bo8g095300 Brassica oleracea Bo8g095300 I 0.786
Bra007545 Brassica rapa Bra007545 I 0.786
Bra014483 Brassica rapa Bra014483 I 0.786
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.786
Bo6g077190 Brassica oleracea Bo6g077190 I 0.786
Bo4g104940 Brassica oleracea Bo4g104940 I 0.786
ZAT4 Arabidopsis thaliana AT2G45120 D 0.786
ZAT9 Arabidopsis thaliana AT3G60580 D 0.786
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.786
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.786
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.786
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.786
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.786
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.786
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.786
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.786
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.786
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.785
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.785
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.785
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.783
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.782
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.782
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.782
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.782
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.780
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.776
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.776
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.776
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.776
mgf017082m Mimulus guttatus mgf017082m I 0.776
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.776
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.776
Ca_23672 Cicer arietinum Ca_23672 I 0.776
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.776
mgf021094m Mimulus guttatus mgf021094m I 0.775
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.774
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.772
mgf006006m Mimulus guttatus mgf006006m I 0.770
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.770
30170.m013751 Ricinus communis 30170.m013751 I 0.770
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.770
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.770
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.770
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.770
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.770
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.769
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.769
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.769
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.769
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.769
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.769
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.769
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.769
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.769
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.769
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.769
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.769
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.769
Ca_18364 Cicer arietinum Ca_18364 I 0.769
Ca_05641 Cicer arietinum Ca_05641 I 0.769
Ca_01586 Cicer arietinum Ca_01586 I 0.769
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.769
Pm005390 Prunus mume Pm005390 I 0.769
Pm021284 Prunus mume Pm021284 I 0.769
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.769
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.769
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.769
28152.m000908 Ricinus communis 28152.m000908 I 0.769
Bra038219 Brassica rapa Bra038219 I 0.769
Bra022436 Brassica rapa Bra022436 I 0.769
Bo1g113530 Brassica oleracea Bo1g113530 I 0.769
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.769
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.769
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.769
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.769
AZF2 Arabidopsis thaliana AT3G19580 D 0.769
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.769
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.769
PK10188.1 Cannabis sativa PK10188.1 I 0.769
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.769
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.769
MDP0000762756 Malus domestica MDP0000762756 I 0.769
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.769
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.769
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.769
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.769
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.769
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.769
MDP0000573176 Malus domestica MDP0000573176 I 0.769
MDP0000319225 Malus domestica MDP0000319225 I 0.769
MDP0000198015 Malus domestica MDP0000198015 I 0.769
Bo5g113850 Brassica oleracea Bo5g113850 I 0.769
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.769
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.769
OS12G0583700 Oryza sativa OS12G0583700 I 0.769
Si023013m.g Setaria italica Si023013m.g I 0.769
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.769
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.769
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.769
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.769
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.769
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.769
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.769
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.769
TCM_007214 Theobroma cacao TCM_007214 I 0.769
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.769
PGSC0003DMG400030311 Solanum tuberosum PGSC0003DMG400030311 I 0.769
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.769
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.769
TCM_034720 Theobroma cacao TCM_034720 I 0.769
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.769
GSMUA_AchrUn_randomG03030_001 Musa acuminata GSMUA_AchrUn_randomG03030_001 I 0.768
GSMUA_Achr4G12160_001 Musa acuminata GSMUA_Achr4G12160_001 I 0.768
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.765
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.765
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I 0.765
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.765
OS01G0838600 Oryza sativa OS01G0838600 I 0.765
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.765
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.765
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.765
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.765
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.765
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.765
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.765
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.765
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I 0.764
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I 0.764
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I 0.764
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I 0.764
Cla018516 Citrullus lanatus Cla018516 I 0.764
Cucsa.065930 Cucumis sativus Cucsa.065930 I 0.764
Bo4g030570 Brassica oleracea Bo4g030570 I 0.763
cassava35212.m1 Manihot esculenta cassava35212.m1 I 0.763
MTR_7g100100 Medicago truncatula MTR_7g100100 I 0.763
cassava8924.m1 Manihot esculenta cassava8924.m1 I 0.763
Bo4g186920 Brassica oleracea Bo4g186920 I 0.763
Bra017188 Brassica rapa Bra017188 I 0.763
Bra005197 Brassica rapa Bra005197 I 0.763
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I 0.763
Carubv10024141m.g Capsella rubella Carubv10024141m.g I 0.763
28637.m000203 Ricinus communis 28637.m000203 I 0.763
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I 0.762
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I 0.762
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.762
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.762
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.762
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I 0.762
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.762
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I 0.762
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I 0.762
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I 0.762
MDP0000257423 Malus domestica MDP0000257423 I 0.762
Bra000372 Brassica rapa Bra000372 I 0.762
MDP0000137826 Malus domestica MDP0000137826 I 0.762
MTR_7g023560 Medicago truncatula MTR_7g023560 I 0.762
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I 0.762
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.762
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.762
Bo4g195370 Brassica oleracea Bo4g195370 I 0.762
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I 0.762
Bo3g037560 Brassica oleracea Bo3g037560 I 0.762
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I 0.762
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.762
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I 0.762
Lus10030330.g Linum usitatissimum Lus10030330.g I 0.762
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I 0.762
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.762
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.762
GLYMA10G43630 Glycine max GLYMA10G43630 I 0.762
GLYMA13G19570 Glycine max GLYMA13G19570 I 0.762
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.762
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I 0.762
cassava9455.m1 Manihot esculenta cassava9455.m1 I 0.762
GLYMA20G23180 Glycine max GLYMA20G23180 I 0.762
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I 0.762
GLYMA10G05210 Glycine max GLYMA10G05210 I 0.762
Cucsa.165460 Cucumis sativus Cucsa.165460 I 0.762
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.762
GLYMA18G52410 Glycine max GLYMA18G52410 I 0.762
Cla004091 Citrullus lanatus Cla004091 I 0.762
GLYMA19G35740 Glycine max GLYMA19G35740 I 0.762
TCM_022001 Theobroma cacao TCM_022001 I 0.762
GLYMA19G35770 Glycine max GLYMA19G35770 I 0.762
Pm002762 Prunus mume Pm002762 I 0.762
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I 0.762
29585.m000611 Ricinus communis 29585.m000611 I 0.762
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I 0.762
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I 0.762
Pm018761 Prunus mume Pm018761 I 0.762
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I 0.762
mgf023249m Mimulus guttatus mgf023249m I 0.762
Eucgr.A01230 Eucalyptus grandis Eucgr.A01230 I 0.762
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I 0.762
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.762
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.762
Bra040325 Brassica rapa Bra040325 I 0.762
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I 0.762
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I 0.762
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.762
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I 0.762
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I 0.762
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.762
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I 0.762
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.762
GLYMA03G33070 Glycine max GLYMA03G33070 I 0.762
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I 0.762
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.762
GLYMA03G33060 Glycine max GLYMA03G33060 I 0.762
GLYMA03G33050 Glycine max GLYMA03G33050 I 0.762
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I 0.762
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I 0.762
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.762
GLYMA02G10490 Glycine max GLYMA02G10490 I 0.762
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I 0.762
mgf021789m Mimulus guttatus mgf021789m I 0.760
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.759
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.759