LPERR03G21480 (Leersia perrieri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LPERR03G21480 T121909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.782 0.804
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.783
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.763 0.804
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.760 0.652
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.759 0.652
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.759 0.652
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.757 0.761
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.757 0.761
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.757 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G21480.1 C2H2 ZF 62 84
LPERR03G21480.1 C2H2 ZF 123 145

Links

Other C2H2 ZF family TFs
Other Leersia perrieri TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.817
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.812
OS12G0583700 Oryza sativa OS12G0583700 I 0.812
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.811
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.808
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.806
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.806
Ca_05641 Cicer arietinum Ca_05641 I 0.806
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.803
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.793
Si023013m.g Setaria italica Si023013m.g I 0.788
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.788
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.788
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.787
TCM_034720 Theobroma cacao TCM_034720 I 0.787
Bra022436 Brassica rapa Bra022436 I 0.787
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.787
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.787
Ca_01586 Cicer arietinum Ca_01586 I 0.787
TCM_007214 Theobroma cacao TCM_007214 I 0.787
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.787
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.787
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.787
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.787
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.787
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.787
Bra038219 Brassica rapa Bra038219 I 0.787
Ca_18364 Cicer arietinum Ca_18364 I 0.787
Pm021284 Prunus mume Pm021284 I 0.787
MDP0000573176 Malus domestica MDP0000573176 I 0.787
MDP0000762756 Malus domestica MDP0000762756 I 0.787
MDP0000319225 Malus domestica MDP0000319225 I 0.787
MDP0000198015 Malus domestica MDP0000198015 I 0.787
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.787
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.787
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.787
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.787
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.787
PK10188.1 Cannabis sativa PK10188.1 I 0.787
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.787
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.787
Pm005390 Prunus mume Pm005390 I 0.787
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.787
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.787
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.787
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.787
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.787
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.787
Bo1g113530 Brassica oleracea Bo1g113530 I 0.787
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.787
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.787
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.787
Bo5g113850 Brassica oleracea Bo5g113850 I 0.787
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.787
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.786
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.786
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.786
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.783
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.783
30174.m008818 Ricinus communis 30174.m008818 I 0.783
mgf017082m Mimulus guttatus mgf017082m I 0.783
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.782
mgf021094m Mimulus guttatus mgf021094m I 0.782
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.782
AZF2 Arabidopsis thaliana AT3G19580 D 0.782
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.782
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.782
Si037343m.g Setaria italica Si037343m.g N 0.782
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.781
mgf021789m Mimulus guttatus mgf021789m I 0.781
30170.m013751 Ricinus communis 30170.m013751 I 0.780
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.778
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.778
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.778
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.778
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.776
OBART03G22570 Oryza barthii OBART03G22570 I 0.776
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.776
OB03G31780 Oryza brachyantha OB03G31780 I 0.776
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.776
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I 0.776
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.776
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.776
OS03G0437200 Oryza sativa OS03G0437200 I 0.776
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.774
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.773
28152.m000908 Ricinus communis 28152.m000908 I 0.773
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.773
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.773
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.772
Bra012914 Brassica rapa Bra012914 I 0.772
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.772
Bra029985 Brassica rapa Bra029985 I 0.772
Bo1g081350 Brassica oleracea Bo1g081350 I 0.772
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.772
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.771
mgf006006m Mimulus guttatus mgf006006m I 0.771
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.769
29661.m000908 Ricinus communis 29661.m000908 I 0.769
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.768
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.766
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.766
Bra031834 Brassica rapa Bra031834 I 0.766
AZF1 Arabidopsis thaliana AT5G67450 D 0.766
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.766
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.766
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.766
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.766
Bo9g019120 Brassica oleracea Bo9g019120 I 0.766
Si032711m.g Setaria italica Si032711m.g I 0.766
Bo2g168030 Brassica oleracea Bo2g168030 I 0.766
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.766
Bra037845 Brassica rapa Bra037845 I 0.766
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.765
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.765
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.765
Ca_23672 Cicer arietinum Ca_23672 I 0.765
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.765
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.765
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.765
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.765
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.765
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.765
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.765
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.765
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.765
AZF3 Arabidopsis thaliana AT5G43170 I 0.764
OB03G42170 Oryza brachyantha OB03G42170 I 0.764
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.764
OB03G31790 Oryza brachyantha OB03G31790 N 0.763
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.763
Bo9g181170 Brassica oleracea Bo9g181170 I 0.763
OBART03G22560 Oryza barthii OBART03G22560 N 0.763
OS03G0437100 Oryza sativa OS03G0437100 N 0.763
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.763
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.763
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.763
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.763
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.763
F775_12743 Aegilops tauschii F775_12743 N 0.763
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.763
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.763
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.763
ZAT6 Arabidopsis thaliana AT5G04340 D 0.763
OS11G0340477 Oryza sativa OS11G0340477 N 0.763
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.763
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.763
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.763
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.763
PGSC0003DMG400045547 Solanum tuberosum PGSC0003DMG400045547 I 0.763
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.763
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.763
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.763
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.763
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.763
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.763
Bra009464 Brassica rapa Bra009464 I 0.763
Si037516m.g Setaria italica Si037516m.g N 0.763
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.763
Bo7g048650 Brassica oleracea Bo7g048650 I 0.762
Bo5g052290 Brassica oleracea Bo5g052290 I 0.762
Bra032845 Brassica rapa Bra032845 I 0.762
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.762
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.760
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.760
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.760
ZAT1 Arabidopsis thaliana AT1G02030 D 0.760
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.759
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.759
OB04G28040 Oryza brachyantha OB04G28040 I 0.759
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.759
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.759
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.759
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.759
ZAT4 Arabidopsis thaliana AT2G45120 D 0.759
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.759
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.759
ZAT9 Arabidopsis thaliana AT3G60580 D 0.759
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.759
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.759
Bo8g095300 Brassica oleracea Bo8g095300 I 0.759
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.759
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.759
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.759
Bo4g104940 Brassica oleracea Bo4g104940 I 0.759
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.759
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.759
OS04G0552700 Oryza sativa OS04G0552700 I 0.759
Bra003422 Brassica rapa Bra003422 I 0.759
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.759
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.759
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.759
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.759
Bra007545 Brassica rapa Bra007545 I 0.759
Bra014483 Brassica rapa Bra014483 I 0.759
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.759
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.759
Bo6g077190 Brassica oleracea Bo6g077190 I 0.759
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.759
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.759
OBART04G21020 Oryza barthii OBART04G21020 I 0.759
Si010615m.g Setaria italica Si010615m.g I 0.759
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.759
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.759
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.759
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.758
MLOC_70662 Hordeum vulgare MLOC_70662 I 0.758
Bo7g065200 Brassica oleracea Bo7g065200 I 0.758
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.758
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.758
Bra033666 Brassica rapa Bra033666 I 0.758
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.758
TCM_000780 Theobroma cacao TCM_000780 I 0.757
Bo3g142840 Brassica oleracea Bo3g142840 I 0.757
Bra010922 Brassica rapa Bra010922 I 0.757
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.757
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.757
ZAT10 Arabidopsis thaliana AT1G27730 D 0.757