AZF3 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT5G43170 T080883_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.816 0.891
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.809 0.848
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.809 0.848
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.809 0.848
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.792 0.804
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.780 0.826
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.780 0.826
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.769 0.696
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.769 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G43170.1 C2H2 ZF 75 97
AT5G43170.1 C2H2 ZF 118 140

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.827
Bo7g065200 Brassica oleracea Bo7g065200 I 0.821
Bra033666 Brassica rapa Bra033666 I 0.821
Bo9g181170 Brassica oleracea Bo9g181170 I 0.816
Bra009464 Brassica rapa Bra009464 I 0.816
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.816
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.816
ZAT6 Arabidopsis thaliana AT5G04340 D 0.816
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.816
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.816
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.816
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.816
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.814
Bo7g048650 Brassica oleracea Bo7g048650 I 0.814
Bra010922 Brassica rapa Bra010922 I 0.809
ZAT10 Arabidopsis thaliana AT1G27730 D 0.809
Bo3g142840 Brassica oleracea Bo3g142840 I 0.809
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.809
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.806
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.802
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.792
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.792
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.792
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.792
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.792
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.792
Ca_01586 Cicer arietinum Ca_01586 I 0.792
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.792
Pm005390 Prunus mume Pm005390 I 0.792
Pm021284 Prunus mume Pm021284 I 0.792
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.792
Ca_18364 Cicer arietinum Ca_18364 I 0.792
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.792
TCM_007214 Theobroma cacao TCM_007214 I 0.792
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.792
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.792
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.792
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.792
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.792
PK10188.1 Cannabis sativa PK10188.1 I 0.792
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.792
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.792
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.792
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.792
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.792
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.792
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.792
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.792
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.792
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.792
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.792
MDP0000198015 Malus domestica MDP0000198015 I 0.792
MDP0000762756 Malus domestica MDP0000762756 I 0.792
MDP0000573176 Malus domestica MDP0000573176 I 0.792
MDP0000319225 Malus domestica MDP0000319225 I 0.792
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.792
TCM_034720 Theobroma cacao TCM_034720 I 0.792
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.792
Bo5g113850 Brassica oleracea Bo5g113850 I 0.792
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.792
Bra022436 Brassica rapa Bra022436 I 0.792
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.792
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.792
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.792
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.792
Bo1g113530 Brassica oleracea Bo1g113530 I 0.792
Bra038219 Brassica rapa Bra038219 I 0.792
AZF2 Arabidopsis thaliana AT3G19580 D 0.792
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.792
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.791
Cla022966 Citrullus lanatus Cla022966 I 0.791
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.791
Cucsa.395710 Cucumis sativus Cucsa.395710 I 0.791
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.791
TCM_000780 Theobroma cacao TCM_000780 I 0.790
30170.m013751 Ricinus communis 30170.m013751 I 0.790
Bra032845 Brassica rapa Bra032845 I 0.790
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.790
Bo5g052290 Brassica oleracea Bo5g052290 I 0.790
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I 0.783
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.782
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.782
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.782
28152.m000908 Ricinus communis 28152.m000908 I 0.782
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.782
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.782
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.781
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.781
Bra018817 Brassica rapa Bra018817 I 0.781
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.780
Bra037845 Brassica rapa Bra037845 I 0.780
AZF1 Arabidopsis thaliana AT5G67450 D 0.780
Bo1g081350 Brassica oleracea Bo1g081350 I 0.780
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.780
Bo2g168030 Brassica oleracea Bo2g168030 I 0.780
Bra031834 Brassica rapa Bra031834 I 0.780
Bra012914 Brassica rapa Bra012914 I 0.780
Bo9g019120 Brassica oleracea Bo9g019120 I 0.780
Bra029985 Brassica rapa Bra029985 I 0.780
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.778
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.777
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.777
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.777
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.776
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.776
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.776
mgf006006m Mimulus guttatus mgf006006m I 0.776
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.776
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.776
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.776
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.776
Si032711m.g Setaria italica Si032711m.g I 0.776
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.775
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.775
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.775
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.775
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.775
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.775
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.775
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.775
Ca_23672 Cicer arietinum Ca_23672 I 0.775
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.775
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.774
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.774
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.774
OB03G42170 Oryza brachyantha OB03G42170 I 0.773
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.769
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.769
ZAT4 Arabidopsis thaliana AT2G45120 D 0.769
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.769
Bra000372 Brassica rapa Bra000372 I 0.769
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.769
Bo4g195370 Brassica oleracea Bo4g195370 I 0.769
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.769
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.769
Si023013m.g Setaria italica Si023013m.g I 0.769
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.769
Bo3g037560 Brassica oleracea Bo3g037560 I 0.769
OS12G0583700 Oryza sativa OS12G0583700 I 0.769
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.769
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.769
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.769
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.769
Bra040325 Brassica rapa Bra040325 I 0.769
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.769
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I 0.769
ZAT9 Arabidopsis thaliana AT3G60580 D 0.769
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.769
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.768
Ca_05641 Cicer arietinum Ca_05641 I 0.768
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.768
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.768
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.768
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.765
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.764
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.764
Cla001400 Citrullus lanatus Cla001400 I 0.764
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.761
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.760
30147.m014242 Ricinus communis 30147.m014242 I 0.760
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.760
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.759
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.759
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.759
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.759
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.758
MLOC_70662 Hordeum vulgare MLOC_70662 I 0.758
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.756