BRADI4G03340 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI4G03340 T082024_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.782 0.841
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.781 0.773
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.781 0.773
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.781 0.773
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G03340.1 C2H2 ZF 73 93
BRADI4G03340.1 C2H2 ZF 130 152

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.794
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I 0.792
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.791
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.786
AZF3 Arabidopsis thaliana AT5G43170 I 0.783
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.783
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.782
Cucsa.395710 Cucumis sativus Cucsa.395710 I 0.782
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.782
Bra009464 Brassica rapa Bra009464 I 0.782
Cla022966 Citrullus lanatus Cla022966 I 0.782
Bo9g181170 Brassica oleracea Bo9g181170 I 0.782
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.782
ZAT6 Arabidopsis thaliana AT5G04340 D 0.782
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.782
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.781
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.781
ZAT10 Arabidopsis thaliana AT1G27730 D 0.781
Bo3g142840 Brassica oleracea Bo3g142840 I 0.781
Bra010922 Brassica rapa Bra010922 I 0.781
Bo7g048650 Brassica oleracea Bo7g048650 I 0.781
Bo5g052290 Brassica oleracea Bo5g052290 I 0.781
Bra032845 Brassica rapa Bra032845 I 0.781
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.777
Bo7g065200 Brassica oleracea Bo7g065200 I 0.777
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.777
Bra033666 Brassica rapa Bra033666 I 0.777
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.776
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.776
Si032711m.g Setaria italica Si032711m.g I 0.776
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.776
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.776
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.774
Si023013m.g Setaria italica Si023013m.g I 0.770
OS12G0583700 Oryza sativa OS12G0583700 I 0.770
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.770
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.768
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.768
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.768
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.768
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.767
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.767
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.766
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.765
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.765
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.763
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.763
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I 0.763
28152.m000908 Ricinus communis 28152.m000908 I 0.763
Bra018817 Brassica rapa Bra018817 I 0.762
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.762
29661.m000908 Ricinus communis 29661.m000908 I 0.759
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.759
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.758
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.758
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.758
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.758
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.758
Bra022436 Brassica rapa Bra022436 I 0.758
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.758
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.758
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.758
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.758
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.758
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.758
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.758
MDP0000198015 Malus domestica MDP0000198015 I 0.758
MDP0000762756 Malus domestica MDP0000762756 I 0.758
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.758
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.758
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.758
Bo5g113850 Brassica oleracea Bo5g113850 I 0.758
MDP0000573176 Malus domestica MDP0000573176 I 0.758
MDP0000319225 Malus domestica MDP0000319225 I 0.758
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.758
PK10188.1 Cannabis sativa PK10188.1 I 0.758
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.758
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.758
Bo1g113530 Brassica oleracea Bo1g113530 I 0.758
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.758
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.758
TCM_034720 Theobroma cacao TCM_034720 I 0.758
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.758
Ca_01586 Cicer arietinum Ca_01586 I 0.758
Ca_18364 Cicer arietinum Ca_18364 I 0.758
TCM_007214 Theobroma cacao TCM_007214 I 0.758
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.758
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.758
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.758
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.758
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.758
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.758
Bra038219 Brassica rapa Bra038219 I 0.758
Pm005390 Prunus mume Pm005390 I 0.758
Pm021284 Prunus mume Pm021284 I 0.758
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.758
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.758
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.758
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.758
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.758
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.758
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.758
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.758
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.758
mgf021789m Mimulus guttatus mgf021789m I 0.757
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.757
mgf006006m Mimulus guttatus mgf006006m I 0.757