Eucgr.F02262 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.F02262 T142851_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.798 0.891
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.776 0.696
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.775 0.696
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.775 0.674
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.774 0.870
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.767 0.826
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.767 0.826
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.767 0.826
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.763 0.783
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.763 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02262.1 C2H2 ZF 155 177
Eucgr.F02262.1 C2H2 ZF 213 235

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.822
Ca_05641 Cicer arietinum Ca_05641 I 0.822
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.822
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.816
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.811
OS12G0583700 Oryza sativa OS12G0583700 I 0.811
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.806
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.806
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.798
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.798
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.798
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.798
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.798
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.798
Bra022436 Brassica rapa Bra022436 I 0.798
TCM_034720 Theobroma cacao TCM_034720 I 0.798
Ca_01586 Cicer arietinum Ca_01586 I 0.798
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.798
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.798
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.798
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.798
Ca_18364 Cicer arietinum Ca_18364 I 0.798
Pm005390 Prunus mume Pm005390 I 0.798
Bra038219 Brassica rapa Bra038219 I 0.798
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.798
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.798
Pm021284 Prunus mume Pm021284 I 0.798
TCM_007214 Theobroma cacao TCM_007214 I 0.798
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.798
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.798
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.798
MDP0000762756 Malus domestica MDP0000762756 I 0.798
MDP0000573176 Malus domestica MDP0000573176 I 0.798
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.798
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.798
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.798
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.798
PK10188.1 Cannabis sativa PK10188.1 I 0.798
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.798
AZF2 Arabidopsis thaliana AT3G19580 D 0.798
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.798
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.798
MDP0000319225 Malus domestica MDP0000319225 I 0.798
MDP0000198015 Malus domestica MDP0000198015 I 0.798
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.798
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.798
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.798
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.798
Bo5g113850 Brassica oleracea Bo5g113850 I 0.798
Bo1g113530 Brassica oleracea Bo1g113530 I 0.798
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.798
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.798
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.798
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.797
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.797
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.797
30170.m013751 Ricinus communis 30170.m013751 I 0.796
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.796
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.793
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.793
30174.m008818 Ricinus communis 30174.m008818 I 0.793
mgf017082m Mimulus guttatus mgf017082m I 0.793
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.792
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.792
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.792
mgf021094m Mimulus guttatus mgf021094m I 0.792
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.788
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.788
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.788
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.788
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.788
28152.m000908 Ricinus communis 28152.m000908 I 0.788
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.788
Si023013m.g Setaria italica Si023013m.g I 0.787
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.787
29661.m000908 Ricinus communis 29661.m000908 I 0.785
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.784
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.783
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.783
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.782
ORGLA03G0210300 Oryza glaberrima ORGLA03G0210300 I 0.782
ORUFI03G23240 Oryza rufipogon ORUFI03G23240 I 0.782
OS03G0437200 Oryza sativa OS03G0437200 I 0.782
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I 0.782
OB03G31780 Oryza brachyantha OB03G31780 I 0.782
OLONG_027628 Oryza longistaminata OLONG_027628 I 0.782
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.782
BGIOSGA010468 Oryza indica BGIOSGA010468 I 0.782
BRADI1G16010 Brachypodium distachyon BRADI1G16010 I 0.782
mgf006006m Mimulus guttatus mgf006006m I 0.782
OBART03G22570 Oryza barthii OBART03G22570 I 0.782
OGLUM03G23350 Oryza glumaepatula OGLUM03G23350 I 0.782
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.776
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.776
ZAT1 Arabidopsis thaliana AT1G02030 D 0.776
Si037343m.g Setaria italica Si037343m.g N 0.776
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.776
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.775
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.775
ZAT9 Arabidopsis thaliana AT3G60580 D 0.775
Bo8g095300 Brassica oleracea Bo8g095300 I 0.775
Bra003422 Brassica rapa Bra003422 I 0.775
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.775
Bra014483 Brassica rapa Bra014483 I 0.775
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.775
Bra007545 Brassica rapa Bra007545 I 0.775
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.775
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.775
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.775
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.775
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.775
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.775
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.775
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.775
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.775
Si032711m.g Setaria italica Si032711m.g I 0.775
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.775
Bo6g077190 Brassica oleracea Bo6g077190 I 0.775
ZAT4 Arabidopsis thaliana AT2G45120 D 0.775
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.775
Bo4g104940 Brassica oleracea Bo4g104940 I 0.775
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I 0.774
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.774
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.774
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.774
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.774
ZAT6 Arabidopsis thaliana AT5G04340 D 0.774
Bra009464 Brassica rapa Bra009464 I 0.774
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I 0.774
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I 0.774
OBART04G21020 Oryza barthii OBART04G21020 I 0.774
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.774
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.774
Bra033666 Brassica rapa Bra033666 I 0.774
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I 0.774
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.774
Bo7g065200 Brassica oleracea Bo7g065200 I 0.774
OB04G28040 Oryza brachyantha OB04G28040 I 0.774
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I 0.774
Si010615m.g Setaria italica Si010615m.g I 0.774
OS04G0552700 Oryza sativa OS04G0552700 I 0.774
Cucsa.352740 Cucumis sativus Cucsa.352740 I 0.774
Bo9g181170 Brassica oleracea Bo9g181170 I 0.774
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I 0.774
C2H2 Arabidopsis lyrata scaffold_600374.1 I 0.774
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.774
Carubv10001868m.g Capsella rubella Carubv10001868m.g I 0.774
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.774
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.773
Bra032845 Brassica rapa Bra032845 I 0.772
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I 0.772
Bo7g048650 Brassica oleracea Bo7g048650 I 0.772
Bo5g052290 Brassica oleracea Bo5g052290 I 0.772
TCM_000780 Theobroma cacao TCM_000780 I 0.772
Lus10038929.g Linum usitatissimum Lus10038929.g N 0.770
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.770
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.770
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.769
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.769
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.769
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.769
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.769
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.769
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.769
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.769
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.769
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.769
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.769
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.769
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.769
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.769
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.769
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.769
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.769
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.769
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.769
Ca_23672 Cicer arietinum Ca_23672 I 0.769
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.768
AZF3 Arabidopsis thaliana AT5G43170 I 0.768
AZF3 Arabidopsis lyrata scaffold_800768.1 I 0.768
Bo3g142840 Brassica oleracea Bo3g142840 I 0.767
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I 0.767
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.767
ZAT10 Arabidopsis thaliana AT1G27730 D 0.767
Bra010922 Brassica rapa Bra010922 I 0.767
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I 0.766
Cucsa.219210 Cucumis sativus Cucsa.219210 I 0.765
Bra018817 Brassica rapa Bra018817 I 0.764
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.764
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.764
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.764
OS02G0659500 Oryza sativa OS02G0659500 I 0.764
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.764
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.764
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.764
OBART02G26700 Oryza barthii OBART02G26700 I 0.764
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.764
Bo1g081350 Brassica oleracea Bo1g081350 I 0.763
Bo2g168030 Brassica oleracea Bo2g168030 I 0.763
Bo9g019120 Brassica oleracea Bo9g019120 I 0.763
Bra037845 Brassica rapa Bra037845 I 0.763
Bra012914 Brassica rapa Bra012914 I 0.763
Bra029985 Brassica rapa Bra029985 I 0.763
Bra031834 Brassica rapa Bra031834 I 0.763
evm.TU.supercontig_6.32 Carica papaya evm.TU.supercontig_6.32 I 0.763
AZF1 Arabidopsis thaliana AT5G67450 D 0.763
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.763
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.762
BGIOSGA010469 Oryza indica BGIOSGA010469 N 0.761
BRADI2G49250 Brachypodium distachyon BRADI2G49250 N 0.761
OS03G0437100 Oryza sativa OS03G0437100 N 0.761
OS11G0340477 Oryza sativa OS11G0340477 N 0.761
LPERR03G19190 Leersia perrieri LPERR03G19190 N 0.761
BGIOSGA010470 Oryza indica BGIOSGA010470 N 0.761
ORUFI03G23230 Oryza rufipogon ORUFI03G23230 N 0.761
ORGLA03G0210200 Oryza glaberrima ORGLA03G0210200 N 0.761
OGLUM03G23340 Oryza glumaepatula OGLUM03G23340 N 0.761
OPUNC03G21190 Oryza punctata OPUNC03G21190 N 0.761
OB03G31790 Oryza brachyantha OB03G31790 N 0.761
OBART03G22560 Oryza barthii OBART03G22560 N 0.761
Si037516m.g Setaria italica Si037516m.g N 0.761
F775_12743 Aegilops tauschii F775_12743 N 0.761
GRMZM5G883760 Zea mays GRMZM5G883760 N 0.761
Traes_2DS_11ADF414D Triticum aestivum Traes_2DS_11ADF414D N 0.761
Traes_2BS_494F02775 Triticum aestivum Traes_2BS_494F02775 N 0.761
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.760
mgf021789m Mimulus guttatus mgf021789m I 0.760
gw1.254.15.1 Physcomitrella patens gw1.254.15.1 I 0.759
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.759
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.759
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.758
LPERR03G19200 Leersia perrieri LPERR03G19200 I 0.758
Sb01g031920 Sorghum bicolor Sb01g031920 N 0.756