CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SJAG_03879
(
Schizosaccharomyces japonicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SJAG_03879
T128942_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
prz1
M01185_2.00
Schizosaccharomyces pombe
HHVMGCCHCN
NGDGGCKBDD
PBM
Lambert et al.(2019)
pTH11143
0.813
0.882
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEB08713
C2H2 ZF
608
632
YVCQIPGCGKRFTRAYNLKSHQNTH
EEB08713
C2H2 ZF
638
660
YQCSVCKKAFARQHDKRRHEQLH
EEB08713
C2H2 ZF
666
687
FACVTCNQKFARMDALNRHYRS
Links
Other
C2H2 ZF
family TFs
Other
Schizosaccharomyces japonicus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy