CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_02367
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_02367
T128977_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rpn-4
M01873_2.00
Neurospora crassa
DCGCCACY
RGTGGCGH
PBM
Weirauch et al.(2014)
pTH8963
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC07360
C2H2 ZF
581
606
YTCTYHGCPLRFDTPQLLQKHKREGH
CCC07360
C2H2 ZF
645
663
CNQIFSRPYDLTRHEDTIH
CCC07360
C2H2 ZF
670
695
VRCEICTDEKTFSRADALTRHFRVCH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
rpn-4
Neurospora crassa
NCU01640
D
0.827
e_gw1.10.56.1
Neurospora discreta
e_gw1.10.56.1
I
0.827
NEUTE1DRAFT_147110
Neurospora tetrasperma
NEUTE1DRAFT_147110
I
0.827